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The map label for this gene is 148643408

Identifier: 148643408

GI number: 148643408

Start: 1372695

End: 1373108

Strand: Reverse

Name: 148643408

Synonym: Msm_1348

Alternate gene names: NA

Gene position: 1373108-1372695 (Counterclockwise)

Preceding gene: 148643409

Following gene: 148643406

Centisome position: 74.1

GC content: 36.71

Gene sequence:

>414_bases
ATGATTAAATACGAACATAAAATAGGCAGTACTGTAGGTACTGGAGTAGAAAAAGAAGTACAAAACAATTTCAACGGAGA
AACCCAAGAAGTAGGTATGTACTTAGCTATGTCTAGACAAGCATCAAGGTCTGGTTACGGAGAATTAGCTGAAGTATTCA
AAAGATTAGCTTGGGAAGAAGCAGAACACGCAGCAAGATTCTGTGAAATGAACGGAATCATTAAAGATGATCTCAAAGCT
AACATTGAAATGATGTTAGAAGGAGAAAAAATGGCTAACGCTGAAAAAAGAGAAGCATCTGAAAAAGCTGCAGCTGAAAA
CCTCGAAGATGCAACTGACTTCTTCAAAGAAAGTTCCAAAGATGAAGGACGCCACTACAAAATCTTAGAAGGAATTTTAG
AAAGATACTTCTAG

Upstream 100 bases:

>100_bases
TGACAGTTATGAGTTAGGAAAAACTTTAGCTAAAGCATGTAAAGAATTATAAAATATGAAATATAAATTTATTAATTACT
AATAATTGGAGGTTATTATT

Downstream 100 bases:

>100_bases
ATTTAGGAAAGAATTTAATTATTCTTCCTTAATCTTTTTTTTAACTCCGGATTTATATTCAGTATCCGAATCTATTTTTA
ATTTAACTAATTTTACAACA

Product: rubrerythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MIKYEHKIGSTVGTGVEKEVQNNFNGETQEVGMYLAMSRQASRSGYGELAEVFKRLAWEEAEHAARFCEMNGIIKDDLKA
NIEMMLEGEKMANAEKREASEKAAAENLEDATDFFKESSKDEGRHYKILEGILERYF

Sequences:

>Translated_137_residues
MIKYEHKIGSTVGTGVEKEVQNNFNGETQEVGMYLAMSRQASRSGYGELAEVFKRLAWEEAEHAARFCEMNGIIKDDLKA
NIEMMLEGEKMANAEKREASEKAAAENLEDATDFFKESSKDEGRHYKILEGILERYF
>Mature_137_residues
MIKYEHKIGSTVGTGVEKEVQNNFNGETQEVGMYLAMSRQASRSGYGELAEVFKRLAWEEAEHAARFCEMNGIIKDDLKA
NIEMMLEGEKMANAEKREASEKAAAENLEDATDFFKESSKDEGRHYKILEGILERYF

Specific function: Unknown

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 15597; Mature: 15597

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKYEHKIGSTVGTGVEKEVQNNFNGETQEVGMYLAMSRQASRSGYGELAEVFKRLAWEE
CCCCCCHHCCHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AEHAARFCEMNGIIKDDLKANIEMMLEGEKMANAEKREASEKAAAENLEDATDFFKESSK
HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC
DEGRHYKILEGILERYF
CCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIKYEHKIGSTVGTGVEKEVQNNFNGETQEVGMYLAMSRQASRSGYGELAEVFKRLAWEE
CCCCCCHHCCHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AEHAARFCEMNGIIKDDLKANIEMMLEGEKMANAEKREASEKAAAENLEDATDFFKESSK
HHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC
DEGRHYKILEGILERYF
CCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]