| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is wecC [H]
Identifier: 148643363
GI number: 148643363
Start: 1310642
End: 1311880
Strand: Reverse
Name: wecC [H]
Synonym: Msm_1303
Alternate gene names: 148643363
Gene position: 1311880-1310642 (Counterclockwise)
Preceding gene: 148643365
Following gene: 148643361
Centisome position: 70.79
GC content: 33.09
Gene sequence:
>1239_bases ATGAAAATTTGTATTATTGGACAAGGCTACATCGGATTGCCAACAGCTGCACTTTTTACAAAAAATCACTGTGAAGTTGT TGGAGTAGATGTTAATGAAAAGGTTGTTGAAACTTTAAATCAGGGAAAAATTCATATTGAAGAACCTGGAATTGGTGAAA TAATTAAAAAAGCTGTTGAAAAAGGCGTATATTCTGCTTCAACAACACCTGTAAAAGCTGATGCATTTATAATAACTGTG CCAACACCATACATTGCTGAAAATTACACATGTGATTTAAGTTATGTTATCAGTGCATGTGAATCCATACTTCCTTATTT GGAAAAAGGAAATACTGTAATTGTTGAATCTACAATAGCTCCAATGTCTATGGATGATTATGTTAAACCTATTTTTGAAA AAGCCGGTTACACAATAGGAAAAGACTTATACCTTGCCCATTGCCCTGAGAGAGTCCTTCCAGGAAAAATCATGTATGAA TTAGTACATAATGATCGTATTGTAGGTGGAATAACCCCTGAATGCTCAATTAAAGCCAGTGAAGTTTATGGTCAGTTTGT TGAAGGTGCATTAATGAAAACAGAAGCAAAAACTGCAGAATTATCCAAATGTATGGAAAATACTTTTAGAGACGTTAACA TTGCACTAGCTAATGAACTTACAAAAATATGTACTAAAATAGGAGTAAATGCATTGGATGTAATTGAAATGGCAAATAAA CATCCAAGAGTAAACCTGCACTCACCAGGACCTGGAGTTGGAGGACACTGCCTAGCTATTGACCCTTATTTCATTTATTC AAAAGCACCGGAATATGCAAAAATAATAAAACTAGCCAGAGACACCAACAACTCAATGCCCGAATTTGTATATGAAAATG TTAAAAAAATAACACCAAATGGCAAAATAGCAGTTTTAGGAGTTGCATATAAAGGAAACACTGGTGATGACAGGGAAAGT CCGGCATATGAGATAATAGCTAAATTAAAAGAAGACAACTATGAAATAAGCATCTGTGATCCCCATGTAGCCAATGAAGA ATATGTTGATTTAAAGCAGGCTACCAAAGATGCAAACCTTATTTTAATATTATGTGACCATGATGAGTTTAAAGACCTTG ATTACGATTTAATCAAAGAAAACATGGAAAAAGCAATTATATTCGACACTAAAAATATAATAAAAGAAGTACCTGAAGAC ATTAAGCTTTACAATTATGGAAATTTATTTAGTCTTTAA
Upstream 100 bases:
>100_bases CATAATTATCCCTATTTTTATTTAATAAAAACTAAATATTATTTATATTAATAAACATAATATATTTAATTATTTGAAAA ATAAAAGGGGCTTTTTATTT
Downstream 100 bases:
>100_bases AAACAATAAAAAGAGAAAAAAAGAAAAATTAGAAATCAATTGATTGATCAGGTTCTACTGGATTACCATTCCAAGCTTTT AAAGTAGTCCATTCTTCAAA
Product: UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MKICIIGQGYIGLPTAALFTKNHCEVVGVDVNEKVVETLNQGKIHIEEPGIGEIIKKAVEKGVYSASTTPVKADAFIITV PTPYIAENYTCDLSYVISACESILPYLEKGNTVIVESTIAPMSMDDYVKPIFEKAGYTIGKDLYLAHCPERVLPGKIMYE LVHNDRIVGGITPECSIKASEVYGQFVEGALMKTEAKTAELSKCMENTFRDVNIALANELTKICTKIGVNALDVIEMANK HPRVNLHSPGPGVGGHCLAIDPYFIYSKAPEYAKIIKLARDTNNSMPEFVYENVKKITPNGKIAVLGVAYKGNTGDDRES PAYEIIAKLKEDNYEISICDPHVANEEYVDLKQATKDANLILILCDHDEFKDLDYDLIKENMEKAIIFDTKNIIKEVPED IKLYNYGNLFSL
Sequences:
>Translated_412_residues MKICIIGQGYIGLPTAALFTKNHCEVVGVDVNEKVVETLNQGKIHIEEPGIGEIIKKAVEKGVYSASTTPVKADAFIITV PTPYIAENYTCDLSYVISACESILPYLEKGNTVIVESTIAPMSMDDYVKPIFEKAGYTIGKDLYLAHCPERVLPGKIMYE LVHNDRIVGGITPECSIKASEVYGQFVEGALMKTEAKTAELSKCMENTFRDVNIALANELTKICTKIGVNALDVIEMANK HPRVNLHSPGPGVGGHCLAIDPYFIYSKAPEYAKIIKLARDTNNSMPEFVYENVKKITPNGKIAVLGVAYKGNTGDDRES PAYEIIAKLKEDNYEISICDPHVANEEYVDLKQATKDANLILILCDHDEFKDLDYDLIKENMEKAIIFDTKNIIKEVPED IKLYNYGNLFSL >Mature_412_residues MKICIIGQGYIGLPTAALFTKNHCEVVGVDVNEKVVETLNQGKIHIEEPGIGEIIKKAVEKGVYSASTTPVKADAFIITV PTPYIAENYTCDLSYVISACESILPYLEKGNTVIVESTIAPMSMDDYVKPIFEKAGYTIGKDLYLAHCPERVLPGKIMYE LVHNDRIVGGITPECSIKASEVYGQFVEGALMKTEAKTAELSKCMENTFRDVNIALANELTKICTKIGVNALDVIEMANK HPRVNLHSPGPGVGGHCLAIDPYFIYSKAPEYAKIIKLARDTNNSMPEFVYENVKKITPNGKIAVLGVAYKGNTGDDRES PAYEIIAKLKEDNYEISICDPHVANEEYVDLKQATKDANLILILCDHDEFKDLDYDLIKENMEKAIIFDTKNIIKEVPED IKLYNYGNLFSL
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=455, Percent_Identity=26.1538461538462, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI296040438, Length=350, Percent_Identity=25.4285714285714, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI296040443, Length=448, Percent_Identity=23.4375, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI48994968, Length=426, Percent_Identity=42.2535211267606, Blast_Score=341, Evalue=5e-95, Organism=Escherichia coli, GI1788340, Length=398, Percent_Identity=26.3819095477387, Blast_Score=94, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17560350, Length=443, Percent_Identity=25.9593679458239, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI17136908, Length=444, Percent_Identity=27.027027027027, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 45648; Mature: 45648
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKICIIGQGYIGLPTAALFTKNHCEVVGVDVNEKVVETLNQGKIHIEEPGIGEIIKKAVE CEEEEEECCCCCCCHHHHEECCCCEEEEECCCHHHHHHHCCCEEEEECCCHHHHHHHHHH KGVYSASTTPVKADAFIITVPTPYIAENYTCDLSYVISACESILPYLEKGNTVIVESTIA CCCCCCCCCCEECCEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC PMSMDDYVKPIFEKAGYTIGKDLYLAHCPERVLPGKIMYELVHNDRIVGGITPECSIKAS CCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHCCHHHHHHHHHCCEEEECCCCCCCEEHH EVYGQFVEGALMKTEAKTAELSKCMENTFRDVNIALANELTKICTKIGVNALDVIEMANK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC HPRVNLHSPGPGVGGHCLAIDPYFIYSKAPEYAKIIKLARDTNNSMPEFVYENVKKITPN CCEEEECCCCCCCCCEEEEECCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC GKIAVLGVAYKGNTGDDRESPAYEIIAKLKEDNYEISICDPHVANEEYVDLKQATKDANL CCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCE ILILCDHDEFKDLDYDLIKENMEKAIIFDTKNIIKEVPEDIKLYNYGNLFSL EEEEECCCCCCCCCHHHHHHCCCCEEEEECHHHHHHCCHHCEEEECCCCCCC >Mature Secondary Structure MKICIIGQGYIGLPTAALFTKNHCEVVGVDVNEKVVETLNQGKIHIEEPGIGEIIKKAVE CEEEEEECCCCCCCHHHHEECCCCEEEEECCCHHHHHHHCCCEEEEECCCHHHHHHHHHH KGVYSASTTPVKADAFIITVPTPYIAENYTCDLSYVISACESILPYLEKGNTVIVESTIA CCCCCCCCCCEECCEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC PMSMDDYVKPIFEKAGYTIGKDLYLAHCPERVLPGKIMYELVHNDRIVGGITPECSIKAS CCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHCCHHHHHHHHHCCEEEECCCCCCCEEHH EVYGQFVEGALMKTEAKTAELSKCMENTFRDVNIALANELTKICTKIGVNALDVIEMANK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC HPRVNLHSPGPGVGGHCLAIDPYFIYSKAPEYAKIIKLARDTNNSMPEFVYENVKKITPN CCEEEECCCCCCCCCEEEEECCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC GKIAVLGVAYKGNTGDDRESPAYEIIAKLKEDNYEISICDPHVANEEYVDLKQATKDANL CCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCE ILILCDHDEFKDLDYDLIKENMEKAIIFDTKNIIKEVPEDIKLYNYGNLFSL EEEEECCCCCCCCCHHHHHHCCCCEEEEECHHHHHHCCHHCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA