| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643361
Identifier: 148643361
GI number: 148643361
Start: 1308294
End: 1309295
Strand: Reverse
Name: 148643361
Synonym: Msm_1301
Alternate gene names: NA
Gene position: 1309295-1308294 (Counterclockwise)
Preceding gene: 148643363
Following gene: 148643360
Centisome position: 70.65
GC content: 25.75
Gene sequence:
>1002_bases ATGTTTTCAAACAATATTAAAAAATTAATAAATAAATTAAAAAAACCATCAACAAATAAAAAAGTTTCAAAAGTTGAAAA TACTGAAGAAACAGATTATAATTTAAAAACCAAACAAAAAGATGAAGAAATATTTCAGAACATCTATAATTTAATTGATA ATTTTATGAAAACAACTCCTAATCCATTATTTAACAATATAGAAATTGAAACTGTTAACAGATGTAACGGAACATGCTCT TTTTGTCCTGTTAACAAGAATCAAGACCCTAGAGAATATAAAAAAATGCCTAAAGAACTGTTTGAAAAAATAATCAAAGA GCTAAAAGAAATTAATTATGATGGAGCTATTGCACTCCATTCCAATAATGAACCATTGCTTGATAAAGAAATCTATAATT ATGCCGAATATGCTAGAAAAGAGCTTCCAAATAGCTATATTTACCTATATACAAATGGTACATTATTAACAATAGACAAA TTTCTTGATTTAACCGAAAATTTGGATTTAATAGTTATTGATAACTATAATGATAACATACAACTTATTGAACCAGTAAA AGAAATTTTTGACTATTGTATCCAACATCCCGAACTTAAAAAGAAAGTTTTAATTGATTTAAGACTTCAAAATCAAATTT TAACAAGCAGAGGCGGGCAGTCAGACAACAGAAATGAAATTTTAACCTTAAAATCATCCTGTTTATTACCATTTAACAAA ATAGTTGTTCAACCAGATGGTAAAGTCCCATTATGCTGTTGTGATCCTTTTGGAAAAGTTATTTTAGGAGATTTAAACAC TGCAAAACTTGTAGATATTTGGAATGGTAAAAAAGCTAAAGAAATACGTGAAATTCTCTATAAAAAAGAAAATAGCAGAA AAAACTTAGAATTATGCAAGCAATGTGATGTTTTAGTTGAAAAATTAGACGGAATACCTTATACTAATACAGATATAACA AATCAATGGGAAAACTTATACTCTATTTTTAATATTCAATAA
Upstream 100 bases:
>100_bases TTTATTATACATAATATTTAAAGTTTTTAATAAATCGACATTCCACAAAAAATAAAAATACCTCAAAAACAAAAGCATTA AACAAAAGGGGTTAAAGATT
Downstream 100 bases:
>100_bases AAAAAAAATGAAATTTTGAAAAAAAAATAAACAAAGCCCCATTCTAAAATAGTTTATATAGTACAAACATCTATATATTT ATCATTAATATGTGAGGTTT
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: Fe-S Oxidoreductase; Radical SAM Superfamily
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MFSNNIKKLINKLKKPSTNKKVSKVENTEETDYNLKTKQKDEEIFQNIYNLIDNFMKTTPNPLFNNIEIETVNRCNGTCS FCPVNKNQDPREYKKMPKELFEKIIKELKEINYDGAIALHSNNEPLLDKEIYNYAEYARKELPNSYIYLYTNGTLLTIDK FLDLTENLDLIVIDNYNDNIQLIEPVKEIFDYCIQHPELKKKVLIDLRLQNQILTSRGGQSDNRNEILTLKSSCLLPFNK IVVQPDGKVPLCCCDPFGKVILGDLNTAKLVDIWNGKKAKEIREILYKKENSRKNLELCKQCDVLVEKLDGIPYTNTDIT NQWENLYSIFNIQ
Sequences:
>Translated_333_residues MFSNNIKKLINKLKKPSTNKKVSKVENTEETDYNLKTKQKDEEIFQNIYNLIDNFMKTTPNPLFNNIEIETVNRCNGTCS FCPVNKNQDPREYKKMPKELFEKIIKELKEINYDGAIALHSNNEPLLDKEIYNYAEYARKELPNSYIYLYTNGTLLTIDK FLDLTENLDLIVIDNYNDNIQLIEPVKEIFDYCIQHPELKKKVLIDLRLQNQILTSRGGQSDNRNEILTLKSSCLLPFNK IVVQPDGKVPLCCCDPFGKVILGDLNTAKLVDIWNGKKAKEIREILYKKENSRKNLELCKQCDVLVEKLDGIPYTNTDIT NQWENLYSIFNIQ >Mature_333_residues MFSNNIKKLINKLKKPSTNKKVSKVENTEETDYNLKTKQKDEEIFQNIYNLIDNFMKTTPNPLFNNIEIETVNRCNGTCS FCPVNKNQDPREYKKMPKELFEKIIKELKEINYDGAIALHSNNEPLLDKEIYNYAEYARKELPNSYIYLYTNGTLLTIDK FLDLTENLDLIVIDNYNDNIQLIEPVKEIFDYCIQHPELKKKVLIDLRLQNQILTSRGGQSDNRNEILTLKSSCLLPFNK IVVQPDGKVPLCCCDPFGKVILGDLNTAKLVDIWNGKKAKEIREILYKKENSRKNLELCKQCDVLVEKLDGIPYTNTDIT NQWENLYSIFNIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38809; Mature: 38809
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSNNIKKLINKLKKPSTNKKVSKVENTEETDYNLKTKQKDEEIFQNIYNLIDNFMKTTP CCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC NPLFNNIEIETVNRCNGTCSFCPVNKNQDPREYKKMPKELFEKIIKELKEINYDGAIALH CCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE SNNEPLLDKEIYNYAEYARKELPNSYIYLYTNGTLLTIDKFLDLTENLDLIVIDNYNDNI CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEHHHHHHHHCCCCEEEEECCCCCE QLIEPVKEIFDYCIQHPELKKKVLIDLRLQNQILTSRGGQSDNRNEILTLKSSCLLPFNK EHHHHHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCE IVVQPDGKVPLCCCDPFGKVILGDLNTAKLVDIWNGKKAKEIREILYKKENSRKNLELCK EEECCCCCCCEEEECCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHH QCDVLVEKLDGIPYTNTDITNQWENLYSIFNIQ HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MFSNNIKKLINKLKKPSTNKKVSKVENTEETDYNLKTKQKDEEIFQNIYNLIDNFMKTTP CCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC NPLFNNIEIETVNRCNGTCSFCPVNKNQDPREYKKMPKELFEKIIKELKEINYDGAIALH CCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE SNNEPLLDKEIYNYAEYARKELPNSYIYLYTNGTLLTIDKFLDLTENLDLIVIDNYNDNI CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEHHHHHHHHCCCCEEEEECCCCCE QLIEPVKEIFDYCIQHPELKKKVLIDLRLQNQILTSRGGQSDNRNEILTLKSSCLLPFNK EHHHHHHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCE IVVQPDGKVPLCCCDPFGKVILGDLNTAKLVDIWNGKKAKEIREILYKKENSRKNLELCK EEECCCCCCCEEEECCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHH QCDVLVEKLDGIPYTNTDITNQWENLYSIFNIQ HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA