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The map label for this gene is mcrC [H]

Identifier: 148643077

GI number: 148643077

Start: 979911

End: 980510

Strand: Reverse

Name: mcrC [H]

Synonym: Msm_1017

Alternate gene names: 148643077

Gene position: 980510-979911 (Counterclockwise)

Preceding gene: 148643078

Following gene: 148643076

Centisome position: 52.91

GC content: 36.17

Gene sequence:

>600_bases
ATGATTGGAAGATGTACTCACGTAGTTGATTGCAGAGCAACAGGTGGTATGGGCAAAGGTGGAGGTCTTGCACAAAGAGG
CACATTTGCTGAATGTGGGGCTGAAGTTTTAGCTGTTGCTATGTCTCCAGGACGTAGACATATTACTAAACCTGTTTGTG
AAATCACTTTTGGATTACGTGAATCCAATGTTTTGACTAGTACAATGGTATTAAATGCAGGTGCAGGTGTTCCTCATGAT
GCTCCAGCTTCTGGTGGTACATTATTTGGTCTCACTGATAAGGAAGTGGAACAAATGAGTAATTTTAAATTACTTGTTAT
TCATTTAGGAGGAGTTAAAAATCATTTAATCTACAAAGCTAGATTGATTTTAAGGAATGTAAACAAGCCTTGTATTATCA
TTTGTGAATCTCCAGTTGACTGTGAAGATTTTGCCAAAATTGGTGTAAAAACTTCTAAAGTCATGCCATCTGAAGAGGAT
GTTAAAACAGAAGGACACATTGTTGATATTGTTAGTGGAGTTATTCGCGGAGAAACAATCTCACAGGAAAAATTAGATGA
AATTATTAGAAAAGTTAAATTAGCATTAGGAGATGCATAA

Upstream 100 bases:

>100_bases
TATGGTGATGCAGATTTACCTGATGAATTAATTGGAATGACTGATCAATATTCAAGTTTTGAAGATCATGTAAATATTGT
TAGAAAGGATGACTTTTAAA

Downstream 100 bases:

>100_bases
TTATGGCACAAATTTATCCAGGTACTTCTCAGGTTGCTCAAAACAGAAGAAACTTTTGTAATCCAGATTACGAGTTAGAA
AAGTTAAGAGAAATCTCTGA

Product: methyl-coenzyme M reductase, C subunit, McrC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MIGRCTHVVDCRATGGMGKGGGLAQRGTFAECGAEVLAVAMSPGRRHITKPVCEITFGLRESNVLTSTMVLNAGAGVPHD
APASGGTLFGLTDKEVEQMSNFKLLVIHLGGVKNHLIYKARLILRNVNKPCIIICESPVDCEDFAKIGVKTSKVMPSEED
VKTEGHIVDIVSGVIRGETISQEKLDEIIRKVKLALGDA

Sequences:

>Translated_199_residues
MIGRCTHVVDCRATGGMGKGGGLAQRGTFAECGAEVLAVAMSPGRRHITKPVCEITFGLRESNVLTSTMVLNAGAGVPHD
APASGGTLFGLTDKEVEQMSNFKLLVIHLGGVKNHLIYKARLILRNVNKPCIIICESPVDCEDFAKIGVKTSKVMPSEED
VKTEGHIVDIVSGVIRGETISQEKLDEIIRKVKLALGDA
>Mature_199_residues
MIGRCTHVVDCRATGGMGKGGGLAQRGTFAECGAEVLAVAMSPGRRHITKPVCEITFGLRESNVLTSTMVLNAGAGVPHD
APASGGTLFGLTDKEVEQMSNFKLLVIHLGGVKNHLIYKARLILRNVNKPCIIICESPVDCEDFAKIGVKTSKVMPSEED
VKTEGHIVDIVSGVIRGETISQEKLDEIIRKVKLALGDA

Specific function: Unknown

COG id: COG4056

COG function: function code H; Methyl coenzyme M reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007687 [H]

Pfam domain/function: PF04609 MCR_C [H]

EC number: NA

Molecular weight: Translated: 21193; Mature: 21193

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGRCTHVVDCRATGGMGKGGGLAQRGTFAECGAEVLAVAMSPGRRHITKPVCEITFGLR
CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHEECCC
ESNVLTSTMVLNAGAGVPHDAPASGGTLFGLTDKEVEQMSNFKLLVIHLGGVKNHLIYKA
CCCEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHCCCEEEEEEECCCCHHHHHHH
RLILRNVNKPCIIICESPVDCEDFAKIGVKTSKVMPSEEDVKTEGHIVDIVSGVIRGETI
HHHHHCCCCCEEEEECCCCCHHHHHHCCCCHHHCCCCHHCCCCCCCHHHHHHHHHCCCCC
SQEKLDEIIRKVKLALGDA
CHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIGRCTHVVDCRATGGMGKGGGLAQRGTFAECGAEVLAVAMSPGRRHITKPVCEITFGLR
CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHHEECCC
ESNVLTSTMVLNAGAGVPHDAPASGGTLFGLTDKEVEQMSNFKLLVIHLGGVKNHLIYKA
CCCEEEEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHCCCEEEEEEECCCCHHHHHHH
RLILRNVNKPCIIICESPVDCEDFAKIGVKTSKVMPSEEDVKTEGHIVDIVSGVIRGETI
HHHHHCCCCCEEEEECCCCCHHHHHHCCCCHHHCCCCHHCCCCCCCHHHHHHHHHCCCCC
SQEKLDEIIRKVKLALGDA
CHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7929010; 9371463 [H]