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The map label for this gene is mtrC [H]

Identifier: 148643072

GI number: 148643072

Start: 974829

End: 975641

Strand: Reverse

Name: mtrC [H]

Synonym: Msm_1012

Alternate gene names: 148643072

Gene position: 975641-974829 (Counterclockwise)

Preceding gene: 148643073

Following gene: 148643071

Centisome position: 52.65

GC content: 36.41

Gene sequence:

>813_bases
ATGTCTGCTGGTGGAAGTGCTGATGGTGCTGTCAGTTCAATAAACAATAATCATTTATTGATTTTAGGAATTATTGGTGG
ATTAGTAGGAATTTATTTATGTAGTATCAATGATGTTATTGGTCCAGTTATTGCAGGTCTCGGTTCAGTATGTGCTACTG
TATGGGGAGCTAATGCTATACGTAGTGTAGCTAGTTACGGTTTAGGTACTGGTGTACCTTCTATTGGTTACATGACATTA
TCTATTGGTATTATCGGTTCTTTAGCAGGTCTTGCTGTAGGTCTTATATACCCACAATTTAACATGCTAGGACCTGTATT
TGGTTTAATATTTTCAATGATTATCGGTGCTGTTGTTGCATTAATCGCTACTAAAATTATTGGTATGAAAATCCCAATTA
TGGTAAGATGTACTGTTGAAATTGCTGGAGCAGGTGCTTTATCTGTTTTATGTTTATCTGCTGCTGTAACTGGTGCTTTT
GATGCAAATTCCATTTGTGAATATGTTGTAGCTCCAGGATTTATCGCAGTATTCTTTATAATGTGTACTATGGCAATTCA
ACATCCATTCAACGCATGTTTAGGTCCAAATGAAGATCAAGTAAGGACTCTTAAATGTGCTGCATCTACTGGATTCTTAT
CTATGATTATTACTGGTCTTTTATCCAGTATTACTGGCGGATTCGGATGGTTTGCTGTTCTTATCGTTGGATTAATTGGA
TGGGTCATTTCATTCAGATTATTTGTTCAAGCTTCATGCGATGCTGCAGCTTCAGTTAAATGGGCTGGATTATGGCCTAA
ATTAGAGGAATAA

Upstream 100 bases:

>100_bases
GATCCTAAATTTAAAAGGATTGGTAGAGGAGCATTATCTTGTGCTATTGCATCTATAGTAGTTGGAGTATTTTGTGTATT
ATTAACTGGAGGTATTTAAA

Downstream 100 bases:

>100_bases
ATGGAAGGTTTTATGTATGGCTCAAATGTTACCTATGATTCAAATTGTACCTAATATGAATTTGGCTCTTGACCCTGTTT
CCGGAGTTATTGGTGCATCT

Product: tetrahydromethanopterin S-methyltransferase subunit C

Products: NA

Alternate protein names: N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit C [H]

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSAGGSADGAVSSINNNHLLILGIIGGLVGIYLCSINDVIGPVIAGLGSVCATVWGANAIRSVASYGLGTGVPSIGYMTL
SIGIIGSLAGLAVGLIYPQFNMLGPVFGLIFSMIIGAVVALIATKIIGMKIPIMVRCTVEIAGAGALSVLCLSAAVTGAF
DANSICEYVVAPGFIAVFFIMCTMAIQHPFNACLGPNEDQVRTLKCAASTGFLSMIITGLLSSITGGFGWFAVLIVGLIG
WVISFRLFVQASCDAAASVKWAGLWPKLEE

Sequences:

>Translated_270_residues
MSAGGSADGAVSSINNNHLLILGIIGGLVGIYLCSINDVIGPVIAGLGSVCATVWGANAIRSVASYGLGTGVPSIGYMTL
SIGIIGSLAGLAVGLIYPQFNMLGPVFGLIFSMIIGAVVALIATKIIGMKIPIMVRCTVEIAGAGALSVLCLSAAVTGAF
DANSICEYVVAPGFIAVFFIMCTMAIQHPFNACLGPNEDQVRTLKCAASTGFLSMIITGLLSSITGGFGWFAVLIVGLIG
WVISFRLFVQASCDAAASVKWAGLWPKLEE
>Mature_269_residues
SAGGSADGAVSSINNNHLLILGIIGGLVGIYLCSINDVIGPVIAGLGSVCATVWGANAIRSVASYGLGTGVPSIGYMTLS
IGIIGSLAGLAVGLIYPQFNMLGPVFGLIFSMIIGAVVALIATKIIGMKIPIMVRCTVEIAGAGALSVLCLSAAVTGAFD
ANSICEYVVAPGFIAVFFIMCTMAIQHPFNACLGPNEDQVRTLKCAASTGFLSMIITGLLSSITGGFGWFAVLIVGLIGW
VISFRLFVQASCDAAASVKWAGLWPKLEE

Specific function: Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step [H]

COG id: COG4061

COG function: function code H; Tetrahydromethanopterin S-methyltransferase, subunit C

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mtrC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005865
- ProDom:   PD013899 [H]

Pfam domain/function: PF04211 MtrC [H]

EC number: =2.1.1.86 [H]

Molecular weight: Translated: 27586; Mature: 27455

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGGSADGAVSSINNNHLLILGIIGGLVGIYLCSINDVIGPVIAGLGSVCATVWGANAI
CCCCCCCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSVASYGLGTGVPSIGYMTLSIGIIGSLAGLAVGLIYPQFNMLGPVFGLIFSMIIGAVVA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIATKIIGMKIPIMVRCTVEIAGAGALSVLCLSAAVTGAFDANSICEYVVAPGFIAVFFI
HHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
MCTMAIQHPFNACLGPNEDQVRTLKCAASTGFLSMIITGLLSSITGGFGWFAVLIVGLIG
HHHHHHHCCHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
WVISFRLFVQASCDAAASVKWAGLWPKLEE
HHHHHHHHHHHCCCHHHCCEECCCCCCCCC
>Mature Secondary Structure 
SAGGSADGAVSSINNNHLLILGIIGGLVGIYLCSINDVIGPVIAGLGSVCATVWGANAI
CCCCCCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSVASYGLGTGVPSIGYMTLSIGIIGSLAGLAVGLIYPQFNMLGPVFGLIFSMIIGAVVA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIATKIIGMKIPIMVRCTVEIAGAGALSVLCLSAAVTGAFDANSICEYVVAPGFIAVFFI
HHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
MCTMAIQHPFNACLGPNEDQVRTLKCAASTGFLSMIITGLLSSITGGFGWFAVLIVGLIG
HHHHHHHCCHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
WVISFRLFVQASCDAAASVKWAGLWPKLEE
HHHHHHHHHHHCCCHHHCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]