Click here to switch to the map view.

The map label for this gene is 148643009

Identifier: 148643009

GI number: 148643009

Start: 911230

End: 911691

Strand: Reverse

Name: 148643009

Synonym: Msm_0949

Alternate gene names: NA

Gene position: 911691-911230 (Counterclockwise)

Preceding gene: 148643010

Following gene: 148643008

Centisome position: 49.2

GC content: 29.0

Gene sequence:

>462_bases
ATGCAAATTCAAGATAAAATTATTCCTGATCAAAAAATAGCTGTTATTAATTATAAAGGTCCAATTTCTGATTTGGAAGT
ATTGCTTTCCAAATTAATGGATTGGGTTGAAACAGAAGAAATTAAAACAATTGGGGAACCTTTTATAATATATTACTCTC
CAAGACATAGTGTAAATCAAGGGGATGCAGTATTTGATGTAGGTATAGCTATTGAAGGTAATGCACAAGCAAAAGATATT
ATTAAAACTGCGGATTTATTTGAACATGGCGTTTTAAGTGGAATTCATGAAGGTTCTATTGATAATATTTTAGATAGCTA
TGATACAATGGTTAAAGTAGCTCAAGAAAACAATTATGATATTATTGGTTCACCTACTGAAGTTTTAGTAAAAAATATTC
ACAATGCAGACAGCGAAGAAGAATATATTACTGAAATAAGATTGCCAATCATTAAAATGTAG

Upstream 100 bases:

>100_bases
AAAGTTCCAAAATCTGTTGAACTTCTTGATGAAGGAGAAGAAGTTGAGGTATATTTATTTAACATAAATTAAAAATATTA
AATAAAAAAAGGTGAATCAA

Downstream 100 bases:

>100_bases
GTCATAGCATGGCTAAAAAGAATGAAGAAATAGACATTGATGAAGAGATTAAAAGAATTTCCCGTAAAACTAATGTTGAT
TTCCTTAAATCTGAAAGAAC

Product: transcriptional activator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MQIQDKIIPDQKIAVINYKGPISDLEVLLSKLMDWVETEEIKTIGEPFIIYYSPRHSVNQGDAVFDVGIAIEGNAQAKDI
IKTADLFEHGVLSGIHEGSIDNILDSYDTMVKVAQENNYDIIGSPTEVLVKNIHNADSEEEYITEIRLPIIKM

Sequences:

>Translated_153_residues
MQIQDKIIPDQKIAVINYKGPISDLEVLLSKLMDWVETEEIKTIGEPFIIYYSPRHSVNQGDAVFDVGIAIEGNAQAKDI
IKTADLFEHGVLSGIHEGSIDNILDSYDTMVKVAQENNYDIIGSPTEVLVKNIHNADSEEEYITEIRLPIIKM
>Mature_153_residues
MQIQDKIIPDQKIAVINYKGPISDLEVLLSKLMDWVETEEIKTIGEPFIIYYSPRHSVNQGDAVFDVGIAIEGNAQAKDI
IKTADLFEHGVLSGIHEGSIDNILDSYDTMVKVAQENNYDIIGSPTEVLVKNIHNADSEEEYITEIRLPIIKM

Specific function: Unknown

COG id: COG4978

COG function: function code KT; Transcriptional regulator, effector-binding domain/component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17158; Mature: 17158

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIQDKIIPDQKIAVINYKGPISDLEVLLSKLMDWVETEEIKTIGEPFIIYYSPRHSVNQ
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
GDAVFDVGIAIEGNAQAKDIIKTADLFEHGVLSGIHEGSIDNILDSYDTMVKVAQENNYD
CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCE
IIGSPTEVLVKNIHNADSEEEYITEIRLPIIKM
EECCCHHHHHHHHCCCCCHHHHHHHHCCCEECC
>Mature Secondary Structure
MQIQDKIIPDQKIAVINYKGPISDLEVLLSKLMDWVETEEIKTIGEPFIIYYSPRHSVNQ
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
GDAVFDVGIAIEGNAQAKDIIKTADLFEHGVLSGIHEGSIDNILDSYDTMVKVAQENNYD
CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCE
IIGSPTEVLVKNIHNADSEEEYITEIRLPIIKM
EECCCHHHHHHHHCCCCCHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA