Click here to switch to the map view.

The map label for this gene is 148642925

Identifier: 148642925

GI number: 148642925

Start: 819824

End: 821023

Strand: Reverse

Name: 148642925

Synonym: Msm_0865

Alternate gene names: NA

Gene position: 821023-819824 (Counterclockwise)

Preceding gene: 148642928

Following gene: 148642924

Centisome position: 44.3

GC content: 36.58

Gene sequence:

>1200_bases
ATGGTAATAATTGTAGGTTCTGGAGCAGGAGGAGCAATATTAGCAATGGAATTGGCTAAATCTAATGTGCCAGTAACCAT
AATCGAAAAAGGAAAATATATTGACTCTAAAGATGCTTTTAATTATTATGATAAATACAATGGCAGTGTTGATTTGCTTA
CAGCTACATGTGTTGGAGGTTCAACAATGGTTTCAATGGCTAACATGGTTAGGGCATTAGATGAGGAGTTATATGATTAT
GGAATTGATCTTTCAGAAGAATATGATTATGTTGAAAATCTGATTAAGGTTCATGGTTTGGATGACACTCATATAGGCAA
AGGAACACAATTATTTTTGGATGCAGCTGAAGAGCTGGGTTTAAATCCGATTAAAATGCCGAAAGCTATTTATGAAGAAA
AATGTATTCAGTGCGGTCAGTGTGCATTTGGATGTCCTGTTGATGCAAAATGGACAGGAAAACACTTTGTTGACATAGCT
ATTGAAAATGGTGTAGAATTCATTGATGAAGCTGAAATCACTGGCTTGATAACTGAAGATAATCGGATAAAAGGAGTCAA
ATTTATTAAAAATGGAAAAGAGGAAATATTGCACTCTGATACAGTGGTATTGTCTGCCGGAGCTATTGGTTCTGCTTTAA
TTTTAAGAAAAATAGGGATTGATGCCGGAAGAGAACTGTTCTTTGATCCCTTTGTTTCAGTAGGAGGAGTTATAAAAGAC
ATTAACTTCAACACTGAAGTTCAGATGGCGGGTCTTGTTGTTGGCAAAAACTTTGTTCTGTCACCTCATTACTCATCATT
CATTCCGTCTAAAATAGGGGGGGATGCTGAACCTAAAGATATATTGAGTATCATGGTTAAAACATCTGATGAATGCAAAG
GATACATAACTGATGACGGGGATGTTGTTAAAATAAACACTATTAATGATATCAGGTATTTGGCTGAAGGTGCAGCTGCT
GCAGGTTTTATTCTGGAAAAAGCAGGTGTTAATCCGGCTACAATAGCTTCTACAGTTTACAGAGGAGCACATCCCGGCGG
CAGTGCAGCTATTGGAAAATTTGTAGACAGCAACCTGGAAACTGAAATTAAAGGTTTGTTTGTTGATGATGCAAGTGTGT
TACCAATTTCTCCAGGAAAACCTCCGATTTTAACTATCATGGCATTATCTAAAAGATTGGCTGATTATTTAATTGGCTGA

Upstream 100 bases:

>100_bases
CTTTTTTTATTTCTTTTTCCAAATATATCCTTTGTGTTTAAATACAATAAAAAATATAACTCATGTTATAGATTTTTTTT
AAAAGTTATAAGGTGATTAA

Downstream 100 bases:

>100_bases
TTTTTTTTATAAACTAAAAATTTATATGATTTTACATAAATATCTTTAATTATGAAATCTGAATGCGCATGCCCTATTGA
TAAAGCAGTTGTATTGTTTA

Product: putative glucose-methanol-choline oxidoreductase (FAD-dependent)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MVIIVGSGAGGAILAMELAKSNVPVTIIEKGKYIDSKDAFNYYDKYNGSVDLLTATCVGGSTMVSMANMVRALDEELYDY
GIDLSEEYDYVENLIKVHGLDDTHIGKGTQLFLDAAEELGLNPIKMPKAIYEEKCIQCGQCAFGCPVDAKWTGKHFVDIA
IENGVEFIDEAEITGLITEDNRIKGVKFIKNGKEEILHSDTVVLSAGAIGSALILRKIGIDAGRELFFDPFVSVGGVIKD
INFNTEVQMAGLVVGKNFVLSPHYSSFIPSKIGGDAEPKDILSIMVKTSDECKGYITDDGDVVKINTINDIRYLAEGAAA
AGFILEKAGVNPATIASTVYRGAHPGGSAAIGKFVDSNLETEIKGLFVDDASVLPISPGKPPILTIMALSKRLADYLIG

Sequences:

>Translated_399_residues
MVIIVGSGAGGAILAMELAKSNVPVTIIEKGKYIDSKDAFNYYDKYNGSVDLLTATCVGGSTMVSMANMVRALDEELYDY
GIDLSEEYDYVENLIKVHGLDDTHIGKGTQLFLDAAEELGLNPIKMPKAIYEEKCIQCGQCAFGCPVDAKWTGKHFVDIA
IENGVEFIDEAEITGLITEDNRIKGVKFIKNGKEEILHSDTVVLSAGAIGSALILRKIGIDAGRELFFDPFVSVGGVIKD
INFNTEVQMAGLVVGKNFVLSPHYSSFIPSKIGGDAEPKDILSIMVKTSDECKGYITDDGDVVKINTINDIRYLAEGAAA
AGFILEKAGVNPATIASTVYRGAHPGGSAAIGKFVDSNLETEIKGLFVDDASVLPISPGKPPILTIMALSKRLADYLIG
>Mature_399_residues
MVIIVGSGAGGAILAMELAKSNVPVTIIEKGKYIDSKDAFNYYDKYNGSVDLLTATCVGGSTMVSMANMVRALDEELYDY
GIDLSEEYDYVENLIKVHGLDDTHIGKGTQLFLDAAEELGLNPIKMPKAIYEEKCIQCGQCAFGCPVDAKWTGKHFVDIA
IENGVEFIDEAEITGLITEDNRIKGVKFIKNGKEEILHSDTVVLSAGAIGSALILRKIGIDAGRELFFDPFVSVGGVIKD
INFNTEVQMAGLVVGKNFVLSPHYSSFIPSKIGGDAEPKDILSIMVKTSDECKGYITDDGDVVKINTINDIRYLAEGAAA
AGFILEKAGVNPATIASTVYRGAHPGGSAAIGKFVDSNLETEIKGLFVDDASVLPISPGKPPILTIMALSKRLADYLIG

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR013027 [H]

Pfam domain/function: PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 42677; Mature: 42677

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIIVGSGAGGAILAMELAKSNVPVTIIEKGKYIDSKDAFNYYDKYNGSVDLLTATCVGG
CEEEEECCCCCEEEEEEHHCCCCCEEEEECCCEECCCCCCCHHHHCCCCEEEEEEEECCC
STMVSMANMVRALDEELYDYGIDLSEEYDYVENLIKVHGLDDTHIGKGTQLFLDAAEELG
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHEEEECHHHCC
LNPIKMPKAIYEEKCIQCGQCAFGCPVDAKWTGKHFVDIAIENGVEFIDEAEITGLITED
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCEEEEEECC
NRIKGVKFIKNGKEEILHSDTVVLSAGAIGSALILRKIGIDAGRELFFDPFVSVGGVIKD
CCCCCHHHHHCCHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEE
INFNTEVQMAGLVVGKNFVLSPHYSSFIPSKIGGDAEPKDILSIMVKTSDECKGYITDDG
CCCCCEEEEEEEEECCCEEECCCHHHCCCHHCCCCCCHHHHHHHHHCCCCCCCEEECCCC
DVVKINTINDIRYLAEGAAAAGFILEKAGVNPATIASTVYRGAHPGGSAAIGKFVDSNLE
CEEEEEEHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCC
TEIKGLFVDDASVLPISPGKPPILTIMALSKRLADYLIG
EEEEEEEECCCEEEECCCCCCCEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVIIVGSGAGGAILAMELAKSNVPVTIIEKGKYIDSKDAFNYYDKYNGSVDLLTATCVGG
CEEEEECCCCCEEEEEEHHCCCCCEEEEECCCEECCCCCCCHHHHCCCCEEEEEEEECCC
STMVSMANMVRALDEELYDYGIDLSEEYDYVENLIKVHGLDDTHIGKGTQLFLDAAEELG
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHEEEECHHHCC
LNPIKMPKAIYEEKCIQCGQCAFGCPVDAKWTGKHFVDIAIENGVEFIDEAEITGLITED
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCEEEEEECC
NRIKGVKFIKNGKEEILHSDTVVLSAGAIGSALILRKIGIDAGRELFFDPFVSVGGVIKD
CCCCCHHHHHCCHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEE
INFNTEVQMAGLVVGKNFVLSPHYSSFIPSKIGGDAEPKDILSIMVKTSDECKGYITDDG
CCCCCEEEEEEEEECCCEEECCCHHHCCCHHCCCCCCHHHHHHHHHCCCCCCCEEECCCC
DVVKINTINDIRYLAEGAAAAGFILEKAGVNPATIASTVYRGAHPGGSAAIGKFVDSNLE
CEEEEEEHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCC
TEIKGLFVDDASVLPISPGKPPILTIMALSKRLADYLIG
EEEEEEEECCCEEEECCCCCCCEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]