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The map label for this gene is yvaP [H]

Identifier: 148642924

GI number: 148642924

Start: 819395

End: 819772

Strand: Reverse

Name: yvaP [H]

Synonym: Msm_0864

Alternate gene names: 148642924

Gene position: 819772-819395 (Counterclockwise)

Preceding gene: 148642925

Following gene: 148642917

Centisome position: 44.24

GC content: 25.93

Gene sequence:

>378_bases
ATGAAATCTGAATGCGCATGCCCTATTGATAAAGCAGTTGTATTGTTTAATAAAAAATGGACTATCCAATTAATTAGGGA
TATGTTTTTTGGTAAAAAACAATTTAAAGAGTTTCAAGAAGATAAACCTGATTTAAGTAATAAAGTTTTGTCACAAAGAC
TTAAGGAATTAGAAAATAACGGGCTTGTTGAAAAAAAGGTTTTAAATACGACACCTATTTCTAGCGAATATCATTTAACA
GAGTATGGAAAAAAATTAAATAGGGTAATATATGAGCTTGCTGTATTTATTTTAGATGAATCTGATTTTGTTGAGTATAA
AGATGAAGAAGTTAAAAATCAGATTAAAAACAATTTTAAACAAGCTCTTAATATTTAA

Upstream 100 bases:

>100_bases
AACTATCATGGCATTATCTAAAAGATTGGCTGATTATTTAATTGGCTGATTTTTTTTATAAACTAAAAATTTATATGATT
TTACATAAATATCTTTAATT

Downstream 100 bases:

>100_bases
AATTAAATTTTATAATTTTTTGGAGGGTTTCCTGAAAAGTCAGCTATTGTAGCATCACCGGAGATGGTGAATACTTCGAA
TTCAGGATTATCTCCACTTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKSECACPIDKAVVLFNKKWTIQLIRDMFFGKKQFKEFQEDKPDLSNKVLSQRLKELENNGLVEKKVLNTTPISSEYHLT
EYGKKLNRVIYELAVFILDESDFVEYKDEEVKNQIKNNFKQALNI

Sequences:

>Translated_125_residues
MKSECACPIDKAVVLFNKKWTIQLIRDMFFGKKQFKEFQEDKPDLSNKVLSQRLKELENNGLVEKKVLNTTPISSEYHLT
EYGKKLNRVIYELAVFILDESDFVEYKDEEVKNQIKNNFKQALNI
>Mature_125_residues
MKSECACPIDKAVVLFNKKWTIQLIRDMFFGKKQFKEFQEDKPDLSNKVLSQRLKELENNGLVEKKVLNTTPISSEYHLT
EYGKKLNRVIYELAVFILDESDFVEYKDEEVKNQIKNNFKQALNI

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14752; Mature: 14752

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSECACPIDKAVVLFNKKWTIQLIRDMFFGKKQFKEFQEDKPDLSNKVLSQRLKELENN
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
GLVEKKVLNTTPISSEYHLTEYGKKLNRVIYELAVFILDESDFVEYKDEEVKNQIKNNFK
CCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH
QALNI
HHHCC
>Mature Secondary Structure
MKSECACPIDKAVVLFNKKWTIQLIRDMFFGKKQFKEFQEDKPDLSNKVLSQRLKELENN
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
GLVEKKVLNTTPISSEYHLTEYGKKLNRVIYELAVFILDESDFVEYKDEEVKNQIKNNFK
CCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH
QALNI
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]