| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642871
Identifier: 148642871
GI number: 148642871
Start: 770981
End: 771424
Strand: Reverse
Name: 148642871
Synonym: Msm_0811
Alternate gene names: NA
Gene position: 771424-770981 (Counterclockwise)
Preceding gene: 148642872
Following gene: 148642870
Centisome position: 41.63
GC content: 33.78
Gene sequence:
>444_bases ATGGTGAAAGTAGCTATTTATCCTCCAAATTCATTAATCTTAGCAGATTTAATTGAAAGGAAAGGTCACACTCCTTTAGT TCTTCAAAAACAAATAAGGCAAAAAATTAAAGATCCGGAAATTGATTCTCCTCCAATGAATATTACTGAAGAAGACCCGA TTAAAGGTCTTAAATACGCGGCTATTGAAGTTCCTTCAGGTGTTCGTGGAAGAATGTCCATTATAGGTCCTTTGATAGAT GAAGCTGAAGCAGCTATTTTAGTTGATGGTGCTCCATTTGGTTTTGGTTGTGTAGGTTGTGCTAGAACAAATGAATTGTC AATATTCCTGCTTAGGCAAAGGAATATTCCTATACTTGAAATTACATATCCAAAAAATAGGGATGGAACATTTTTAATGG TAAATCAAATTAATGAGTTTTTAGACTCTCTTAAGGAGGAATAA
Upstream 100 bases:
>100_bases CCTCGTGATGTAGAAGTTGAGGTTGAAAAACCGATTGATGTTGATGAATTTAAAAAAATTATGAATGAATGTTTAGAAAA TAATAATGATAGGTGAAAAC
Downstream 100 bases:
>100_bases TAATGGTTAAAATTGCTTTAGTTTCATGCGGAACTGAATATAGTGGAATTCAAAAAGAAATTGAAAAAGCAGCTAATACT TTTGGTGCAGAAATTATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MVKVAIYPPNSLILADLIERKGHTPLVLQKQIRQKIKDPEIDSPPMNITEEDPIKGLKYAAIEVPSGVRGRMSIIGPLID EAEAAILVDGAPFGFGCVGCARTNELSIFLLRQRNIPILEITYPKNRDGTFLMVNQINEFLDSLKEE
Sequences:
>Translated_147_residues MVKVAIYPPNSLILADLIERKGHTPLVLQKQIRQKIKDPEIDSPPMNITEEDPIKGLKYAAIEVPSGVRGRMSIIGPLID EAEAAILVDGAPFGFGCVGCARTNELSIFLLRQRNIPILEITYPKNRDGTFLMVNQINEFLDSLKEE >Mature_147_residues MVKVAIYPPNSLILADLIERKGHTPLVLQKQIRQKIKDPEIDSPPMNITEEDPIKGLKYAAIEVPSGVRGRMSIIGPLID EAEAAILVDGAPFGFGCVGCARTNELSIFLLRQRNIPILEITYPKNRDGTFLMVNQINEFLDSLKEE
Specific function: Unknown
COG id: COG4050
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012356 [H]
Pfam domain/function: PF09885 DUF2112 [H]
EC number: NA
Molecular weight: Translated: 16355; Mature: 16355
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKVAIYPPNSLILADLIERKGHTPLVLQKQIRQKIKDPEIDSPPMNITEEDPIKGLKYA CEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE AIEVPSGVRGRMSIIGPLIDEAEAAILVDGAPFGFGCVGCARTNELSIFLLRQRNIPILE EEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCEEE ITYPKNRDGTFLMVNQINEFLDSLKEE EECCCCCCCCEEEHHHHHHHHHHHHCC >Mature Secondary Structure MVKVAIYPPNSLILADLIERKGHTPLVLQKQIRQKIKDPEIDSPPMNITEEDPIKGLKYA CEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE AIEVPSGVRGRMSIIGPLIDEAEAAILVDGAPFGFGCVGCARTNELSIFLLRQRNIPILE EEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCEEE ITYPKNRDGTFLMVNQINEFLDSLKEE EECCCCCCCCEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]