| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642853
Identifier: 148642853
GI number: 148642853
Start: 755994
End: 756518
Strand: Reverse
Name: 148642853
Synonym: Msm_0793
Alternate gene names: NA
Gene position: 756518-755994 (Counterclockwise)
Preceding gene: 148642854
Following gene: 148642852
Centisome position: 40.82
GC content: 31.05
Gene sequence:
>525_bases ATGAGTTTACCTTCTGAGCAAAATTGGTTAATTGTTTTTAATCTTTTAACCGATTTAAATAAAAAAGGTTATGATATTCC TAAAGGAATTAATCCGGAATTAGGTTTAATCAGATCTTCAATAAGCTCATATAAAAAAGACCCATCTCATCCTGATTTAA TTAATAGTTTAGCTAAAGCTGAAATGTCTTTAAACAGTATTCAAGAAACACTCTTGGAATTAGCTTCACAAGAAGGTGAA GAATATGTTGACAAATGGTTAGGTTTATTCAAAGATGCAATGCATGGTAAAGAAGTTTTTGAATTTCCTAAATCCCGTTC AACATTCATTGTTAACACTCCTCCGGGATTAACAACAGGGAGAATAACATTGAAAAAAGCATTGGCTGAAGAAAGAGTTC AAGAAATAGCTGAATGGAATGGTCTAATAATTGAATTTGAAGATGATGTTACTGTCGATCTTCATGGAGATAAAGAAGAC CTTAAAACAGGTTTGAAAGAAATGGGATCTTTCTTTTTAGAATAA
Upstream 100 bases:
>100_bases TTTTAGATTCTTATAATAACATTAGAGAAATTGAAAAAGAATTAAAAGATGCTGATGCTAAAATTAATCACACAACCTTA AAAATCATAGGTGGACATTT
Downstream 100 bases:
>100_bases GTAAGTGATATTTATGAAAATTTTAGCAATAAGTGACGTTCACGGAGAAGACAACGAGAATTTATACAAATATCTTAATA ATAATGACATTGATATTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSLPSEQNWLIVFNLLTDLNKKGYDIPKGINPELGLIRSSISSYKKDPSHPDLINSLAKAEMSLNSIQETLLELASQEGE EYVDKWLGLFKDAMHGKEVFEFPKSRSTFIVNTPPGLTTGRITLKKALAEERVQEIAEWNGLIIEFEDDVTVDLHGDKED LKTGLKEMGSFFLE
Sequences:
>Translated_174_residues MSLPSEQNWLIVFNLLTDLNKKGYDIPKGINPELGLIRSSISSYKKDPSHPDLINSLAKAEMSLNSIQETLLELASQEGE EYVDKWLGLFKDAMHGKEVFEFPKSRSTFIVNTPPGLTTGRITLKKALAEERVQEIAEWNGLIIEFEDDVTVDLHGDKED LKTGLKEMGSFFLE >Mature_173_residues SLPSEQNWLIVFNLLTDLNKKGYDIPKGINPELGLIRSSISSYKKDPSHPDLINSLAKAEMSLNSIQETLLELASQEGEE YVDKWLGLFKDAMHGKEVFEFPKSRSTFIVNTPPGLTTGRITLKKALAEERVQEIAEWNGLIIEFEDDVTVDLHGDKEDL KTGLKEMGSFFLE
Specific function: Unknown
COG id: COG4010
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017098 [H]
Pfam domain/function: PF09869 DUF2096 [H]
EC number: NA
Molecular weight: Translated: 19615; Mature: 19483
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPSEQNWLIVFNLLTDLNKKGYDIPKGINPELGLIRSSISSYKKDPSHPDLINSLAKA CCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH EMSLNSIQETLLELASQEGEEYVDKWLGLFKDAMHGKEVFEFPKSRSTFIVNTPPGLTTG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEECCCCCCHH RITLKKALAEERVQEIAEWNGLIIEFEDDVTVDLHGDKEDLKTGLKEMGSFFLE HHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLPSEQNWLIVFNLLTDLNKKGYDIPKGINPELGLIRSSISSYKKDPSHPDLINSLAKA CCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH EMSLNSIQETLLELASQEGEEYVDKWLGLFKDAMHGKEVFEFPKSRSTFIVNTPPGLTTG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEECCCCCCHH RITLKKALAEERVQEIAEWNGLIIEFEDDVTVDLHGDKEDLKTGLKEMGSFFLE HHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]