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The map label for this gene is 148642827

Identifier: 148642827

GI number: 148642827

Start: 727063

End: 728217

Strand: Reverse

Name: 148642827

Synonym: Msm_0767

Alternate gene names: NA

Gene position: 728217-727063 (Counterclockwise)

Preceding gene: 148642828

Following gene: 148642824

Centisome position: 39.3

GC content: 30.91

Gene sequence:

>1155_bases
ATGATAGTTAACAATTCTTTAGATGAAGTTAAAAAAAGAGAAAATGCTTTATCTATTATAAAAAACATCATTGAAACTAA
AGGTCGTAATGAATTATATGATTTAACAGGTTTATCTGGAGGATTTATTGCTTCATCATCCCAATTAAGCTTACTTGAAA
CTTATGTCGGACCGGCTATTTTTGAGGATGAAATTCAGGAAGTTGGAAAAAAACATTTAGGTGGAGAAAAAATTCTTCCA
CTTAACAGAACTTCTTCAGGTATATTGGCCACTATTCTTTCATTAGTTGATGAAGGTTCCAATGTAGTTCACTACCTTGC
CCAATTGCCGGCTCATCCGTCTATTCCAAGAAGTTGTGAATTAGTTAAAGCTAATTATTTTGAAACTGATGATTTTGATA
AATTTGAAATACCTGAAAATACTTCTTTAGTTGTTGTAACAGGCTCAACAATGGACCATAAAGTAATTGATGAAGATATT
TTCAAAAAAGTCATTGAAATGGCTCACGAACAAAATATTCCGGTCATGGTCGATGATGCATCAGGAGCCAGACTTAGAAC
TGTTGTATTTAACCAGAAAAAAGCCTGTGATTTAGGTGCAGATATTACAATTACAAGTACTGATAAATTAATGCCAGGTC
CTAGAGGAGGATTGATGGCTGGTCGTAAAGATTTAGTTGATAAAATTAAAGTTAAAGCTAACCAGTTTGGTCTTGAAGCA
CAACCGCCAGCTATTTTAGCTATGGTTAATGGTATTAAAAATTTCAATGGTGAAAATTTAATTAGAGGATTTTCAAGAAA
AGAAGAGCTGTTTAAATTATTAAATAAGAATTTTAATGCTTTTAGTGAAACTCCGACAGGGGTCATGATTTCATCTCATG
ATTTAGCTAATGAAATCAAAGTTTCACATAATTTATCTGATGATGATTTGGCATTTATTTTTGCATTTATATTATTAAAA
GAGCATGGAATTATTACAATTCCCCCAGTTTCAATGCCTGGTGCATCTACAACAATAAGATTTGATTTGTCTACAAAAGA
TGCATTTAATTTAGATTTAAATGATTTAAATAAAAAAATAGAATCTTCATTTAATAAGCTACAGGAAGTAGTTACAAATG
AAGATAAATGCAGGGAGATTGTATTTACTTCTTAA

Upstream 100 bases:

>100_bases
TGAAAACGAACAGTTTGTTCAAATGCCAGTACCTGAAAAAGATTTAAAAGCATTTGTTGAAGCTTTCAAAGACTTTACAT
TAGAATTCGACTCTGATTAG

Downstream 100 bases:

>100_bases
TTATACATTCTCCAGATATTACTTTTTCTAAAGTTCCGTCAATTTTTTCCACAACTAATGATCCGTCTCTGCTGATGCCT
AAAACATAACCGTCATAAGG

Product: selenocysteine synthase, SelA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MIVNNSLDEVKKRENALSIIKNIIETKGRNELYDLTGLSGGFIASSSQLSLLETYVGPAIFEDEIQEVGKKHLGGEKILP
LNRTSSGILATILSLVDEGSNVVHYLAQLPAHPSIPRSCELVKANYFETDDFDKFEIPENTSLVVVTGSTMDHKVIDEDI
FKKVIEMAHEQNIPVMVDDASGARLRTVVFNQKKACDLGADITITSTDKLMPGPRGGLMAGRKDLVDKIKVKANQFGLEA
QPPAILAMVNGIKNFNGENLIRGFSRKEELFKLLNKNFNAFSETPTGVMISSHDLANEIKVSHNLSDDDLAFIFAFILLK
EHGIITIPPVSMPGASTTIRFDLSTKDAFNLDLNDLNKKIESSFNKLQEVVTNEDKCREIVFTS

Sequences:

>Translated_384_residues
MIVNNSLDEVKKRENALSIIKNIIETKGRNELYDLTGLSGGFIASSSQLSLLETYVGPAIFEDEIQEVGKKHLGGEKILP
LNRTSSGILATILSLVDEGSNVVHYLAQLPAHPSIPRSCELVKANYFETDDFDKFEIPENTSLVVVTGSTMDHKVIDEDI
FKKVIEMAHEQNIPVMVDDASGARLRTVVFNQKKACDLGADITITSTDKLMPGPRGGLMAGRKDLVDKIKVKANQFGLEA
QPPAILAMVNGIKNFNGENLIRGFSRKEELFKLLNKNFNAFSETPTGVMISSHDLANEIKVSHNLSDDDLAFIFAFILLK
EHGIITIPPVSMPGASTTIRFDLSTKDAFNLDLNDLNKKIESSFNKLQEVVTNEDKCREIVFTS
>Mature_384_residues
MIVNNSLDEVKKRENALSIIKNIIETKGRNELYDLTGLSGGFIASSSQLSLLETYVGPAIFEDEIQEVGKKHLGGEKILP
LNRTSSGILATILSLVDEGSNVVHYLAQLPAHPSIPRSCELVKANYFETDDFDKFEIPENTSLVVVTGSTMDHKVIDEDI
FKKVIEMAHEQNIPVMVDDASGARLRTVVFNQKKACDLGADITITSTDKLMPGPRGGLMAGRKDLVDKIKVKANQFGLEA
QPPAILAMVNGIKNFNGENLIRGFSRKEELFKLLNKNFNAFSETPTGVMISSHDLANEIKVSHNLSDDDLAFIFAFILLK
EHGIITIPPVSMPGASTTIRFDLSTKDAFNLDLNDLNKKIESSFNKLQEVVTNEDKCREIVFTS

Specific function: Unknown

COG id: COG1921

COG function: function code E; Selenocysteine synthase [seryl-tRNASer selenium transferase]

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0425 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020033
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR018319 [H]

Pfam domain/function: PF03841 SelA [H]

EC number: NA

Molecular weight: Translated: 42355; Mature: 42355

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNNSLDEVKKRENALSIIKNIIETKGRNELYDLTGLSGGFIASSSQLSLLETYVGPAI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEECCCHHHHHHHHHCHHH
FEDEIQEVGKKHLGGEKILPLNRTSSGILATILSLVDEGSNVVHYLAQLPAHPSIPRSCE
HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCE
LVKANYFETDDFDKFEIPENTSLVVVTGSTMDHKVIDEDIFKKVIEMAHEQNIPVMVDDA
EEECCCCCCCCCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC
SGARLRTVVFNQKKACDLGADITITSTDKLMPGPRGGLMAGRKDLVDKIKVKANQFGLEA
CCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
QPPAILAMVNGIKNFNGENLIRGFSRKEELFKLLNKNFNAFSETPTGVMISSHDLANEIK
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHH
VSHNLSDDDLAFIFAFILLKEHGIITIPPVSMPGASTTIRFDLSTKDAFNLDLNDLNKKI
HCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
ESSFNKLQEVVTNEDKCREIVFTS
HHHHHHHHHHHCCHHHHHHHCCCC
>Mature Secondary Structure
MIVNNSLDEVKKRENALSIIKNIIETKGRNELYDLTGLSGGFIASSSQLSLLETYVGPAI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEECCCHHHHHHHHHCHHH
FEDEIQEVGKKHLGGEKILPLNRTSSGILATILSLVDEGSNVVHYLAQLPAHPSIPRSCE
HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCE
LVKANYFETDDFDKFEIPENTSLVVVTGSTMDHKVIDEDIFKKVIEMAHEQNIPVMVDDA
EEECCCCCCCCCCCEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC
SGARLRTVVFNQKKACDLGADITITSTDKLMPGPRGGLMAGRKDLVDKIKVKANQFGLEA
CCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
QPPAILAMVNGIKNFNGENLIRGFSRKEELFKLLNKNFNAFSETPTGVMISSHDLANEIK
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHH
VSHNLSDDDLAFIFAFILLKEHGIITIPPVSMPGASTTIRFDLSTKDAFNLDLNDLNKKI
HCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
ESSFNKLQEVVTNEDKCREIVFTS
HHHHHHHHHHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]