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The map label for this gene is rpl19e [H]

Identifier: 148642803

GI number: 148642803

Start: 712819

End: 713265

Strand: Reverse

Name: rpl19e [H]

Synonym: Msm_0743

Alternate gene names: 148642803

Gene position: 713265-712819 (Counterclockwise)

Preceding gene: 148642804

Following gene: 148642802

Centisome position: 38.49

GC content: 32.89

Gene sequence:

>447_bases
ATGAATCTTACAACTCAAAAAAGATTAGCTGCTAGTATACTTAAAGTAGGACTCAATCGTGTATGGATTGATCCTGAAAG
AATGGAAGAAGTATCCATGGCAATTACTAGGGAAGGTGTAAAGCAGTTAATAAATAATGGAGCTATTAAAGCTAAACCTC
AAAAAGGTATTAGTAGCTACAGGTCTAAAAAATTAGCAGAACAAAAGAAAAAAGGAAAAAGGAAAGGTAGAGGTAGTGTA
AAAGGAGCTAAAAAAGCTCGTAATCCTAAAAAACAAGAATGGATGACTACAATTAGAGCTTTAAGAAAAGACCTTAAAGA
AATGCGTGATGCAAACGAAATTGATGCTACTACATACCGTAAATTATATAAAATGGCTAAGGGTGGTGCTTTCAGAAGTA
AATCTTACATGAAAACATATGCTCGTGACCATGATTTAATTAAATAG

Upstream 100 bases:

>100_bases
GAATCAATTCCGGGTTTTTTGAATTGATTTTTCTGATTTAAAGGGAATTTAGATTTTTATCTAAATTTATCAGCTATGCT
GAAAATGGAGGATTATATAT

Downstream 100 bases:

>100_bases
GAGGAATAAACGTGGCTCAAGGATCAAATTATAAAGTACCATTTAGAAGGAGAAGAGAAGGAAAAACTGATTACGCAGCT
AGGATGAAATTAGTCGATTA

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MNLTTQKRLAASILKVGLNRVWIDPERMEEVSMAITREGVKQLINNGAIKAKPQKGISSYRSKKLAEQKKKGKRKGRGSV
KGAKKARNPKKQEWMTTIRALRKDLKEMRDANEIDATTYRKLYKMAKGGAFRSKSYMKTYARDHDLIK

Sequences:

>Translated_148_residues
MNLTTQKRLAASILKVGLNRVWIDPERMEEVSMAITREGVKQLINNGAIKAKPQKGISSYRSKKLAEQKKKGKRKGRGSV
KGAKKARNPKKQEWMTTIRALRKDLKEMRDANEIDATTYRKLYKMAKGGAFRSKSYMKTYARDHDLIK
>Mature_148_residues
MNLTTQKRLAASILKVGLNRVWIDPERMEEVSMAITREGVKQLINNGAIKAKPQKGISSYRSKKLAEQKKKGKRKGRGSV
KGAKKARNPKKQEWMTTIRALRKDLKEMRDANEIDATTYRKLYKMAKGGAFRSKSYMKTYARDHDLIK

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family [H]

Homologues:

Organism=Homo sapiens, GI4506609, Length=135, Percent_Identity=37.7777777777778, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17508673, Length=122, Percent_Identity=40.1639344262295, Blast_Score=102, Evalue=9e-23,
Organism=Saccharomyces cerevisiae, GI6319559, Length=133, Percent_Identity=41.3533834586466, Blast_Score=96, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6319444, Length=133, Percent_Identity=41.3533834586466, Blast_Score=96, Evalue=2e-21,
Organism=Drosophila melanogaster, GI45552831, Length=139, Percent_Identity=40.2877697841727, Blast_Score=105, Evalue=9e-24,
Organism=Drosophila melanogaster, GI17136322, Length=139, Percent_Identity=40.2877697841727, Blast_Score=105, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015974 [H]

Pfam domain/function: PF01280 Ribosomal_L19e [H]

EC number: NA

Molecular weight: Translated: 16985; Mature: 16985

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: PS00526 RIBOSOMAL_L19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTTQKRLAASILKVGLNRVWIDPERMEEVSMAITREGVKQLINNGAIKAKPQKGISSY
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
RSKKLAEQKKKGKRKGRGSVKGAKKARNPKKQEWMTTIRALRKDLKEMRDANEIDATTYR
HHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KLYKMAKGGAFRSKSYMKTYARDHDLIK
HHHHHHHCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNLTTQKRLAASILKVGLNRVWIDPERMEEVSMAITREGVKQLINNGAIKAKPQKGISSY
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
RSKKLAEQKKKGKRKGRGSVKGAKKARNPKKQEWMTTIRALRKDLKEMRDANEIDATTYR
HHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KLYKMAKGGAFRSKSYMKTYARDHDLIK
HHHHHHHCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]