| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is ilvB [H]
Identifier: 148642746
GI number: 148642746
Start: 658642
End: 660180
Strand: Reverse
Name: ilvB [H]
Synonym: Msm_0686
Alternate gene names: 148642746
Gene position: 660180-658642 (Counterclockwise)
Preceding gene: 148642747
Following gene: 148642740
Centisome position: 35.62
GC content: 36.65
Gene sequence:
>1539_bases ATGAATGTAGCTGCTTATTTAGTTAAAATCCTTGAAGAGGAAGGTCTGGAAAATATTTTCGGACTTCCGGGAGAACAGAT TCTGCCGTTTTATAAGGCTCTTAAAGACTCCAAAATAAATCATATTCTGGTAAGACACGAACAGGCAGCTATGCATGCGG CAGATGCATATTACAAATCATCCCATAAATTAAGTGCATGTGTAGCTACTGCAGCACCGGGAGCACTTAATTTTACAATG GCTCTGGCAGGAGCATATAAGGACAATGTGCCTCTTCTGGTTTTGACAGGAGACAATCCCACTGATTTGAGAAATGAGGA TGTTTTCCAGTCACTTCCGACATCTGAAATTTTTAGAAATATTGTTGACGAAACATTCAATCCCTTAAACGGAACTGAAG CGGTATATGCACTAAGGGCAGCTATTTATAAAATTAGGCACGACCCAAAAGGCCCGGTTCATATAAACTTGTCAAATGAT GTCCTGTTAAGCGAGGAGTTTCAGGACTTTGATTTATGTTATTTGTGTGAAAATGACCTGTCAAATGTTAAAAAAGCCCA GGAATTAATAAACAAATCTAAAAAACCGCTCTTTGTATTGGGTTCTGGAGCAATATCACAAAGAAAAGTTTTAAAACTGA TAGCTGAAAGTAATGGAATTCCGGTAGCAACTACTTTTAATTCAAAAGGAATCATAGCTGAAAGCAATCCTTTAAATCTG GGAATGGCAGGTACCAGAGGAACTCCCAGAGCAAATTATGCCATAAAAAATTCAGACTGTATCATAGCTTTAGGTGCAAG AGCTTCTGAAAGGACATTTGTTGCTTTGGATGAAATTGAAGATAAGCTGATTCATGTAAATATTAATAAAAAGCATCTTA AAGGAAATTATCCGATTCAGGGAAGTGTTGAAAACTTCTTATATGAAGTAGACTTTAAAAAAGCAGACTGGCTAGATGAA CTGTTGGAAATTGACAACAAAATAGCTGTTGAAGGTTTGGGGGATAAAACACTTCCGTTAAGACCTCAGGTGGCTATTAA TGAAATTCTAAATCAGTATAAGGACAATATTATAATCGGTGATGCCGGAAGTCATATTACATGGGTAACTCTGCTTAAAA AATCCTCTGACTTTGGCCAGCTGCTGTTTCAGTCAGCACTTGGACCAATGGGTTACGGAATTCCGGGAGCTATCGGAGCT GCAGTTGCAAATCCTGATAAAAAAATAATTGTAATCAACGGAGACGGAGATTTCCAGATGAATATTCAGGAACTGGCTAC AATAAAAGAATATGGCTTGAATATTTTAATTTTTATAATAAACAACTCACAATACGGCATTATAAGGCAGCATGAAGTTA ATAAATATGATATGGAACCCTATCAGATAGATTTAAAAAATCCTGACTTTGTAAAAGTAGCTGAAGCATACGGATTAAAA GCAAAAAGGGCAGAAAAACTTGAAGATCTCCAGGATGTGGATGATTATGATATTGTAGATGTTGCTGTAAGGTTTGAAGA TATTCCCCTTCCTAAATAA
Upstream 100 bases:
>100_bases AATACAAAATCAAAAAAGGGGACAGAATAGCTCAGGGAGTTGTTTTTGAAGTTGAAGGCTCCGGGCAATACAGCGGATCT TATCAGGAAGAGGAATAATA
Downstream 100 bases:
>100_bases GGCACTCTTCAACAAATTTTTTTACAATATCTTCATATCCCAGGCAGTTGCCGTCAAATGAATAGTAATAGTATTCCTCA TCCTGGTTATGGATAAATCC
Product: acetolactate synthase (TPP-requiring), large subunit, IlvB
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MNVAAYLVKILEEEGLENIFGLPGEQILPFYKALKDSKINHILVRHEQAAMHAADAYYKSSHKLSACVATAAPGALNFTM ALAGAYKDNVPLLVLTGDNPTDLRNEDVFQSLPTSEIFRNIVDETFNPLNGTEAVYALRAAIYKIRHDPKGPVHINLSND VLLSEEFQDFDLCYLCENDLSNVKKAQELINKSKKPLFVLGSGAISQRKVLKLIAESNGIPVATTFNSKGIIAESNPLNL GMAGTRGTPRANYAIKNSDCIIALGARASERTFVALDEIEDKLIHVNINKKHLKGNYPIQGSVENFLYEVDFKKADWLDE LLEIDNKIAVEGLGDKTLPLRPQVAINEILNQYKDNIIIGDAGSHITWVTLLKKSSDFGQLLFQSALGPMGYGIPGAIGA AVANPDKKIIVINGDGDFQMNIQELATIKEYGLNILIFIINNSQYGIIRQHEVNKYDMEPYQIDLKNPDFVKVAEAYGLK AKRAEKLEDLQDVDDYDIVDVAVRFEDIPLPK
Sequences:
>Translated_512_residues MNVAAYLVKILEEEGLENIFGLPGEQILPFYKALKDSKINHILVRHEQAAMHAADAYYKSSHKLSACVATAAPGALNFTM ALAGAYKDNVPLLVLTGDNPTDLRNEDVFQSLPTSEIFRNIVDETFNPLNGTEAVYALRAAIYKIRHDPKGPVHINLSND VLLSEEFQDFDLCYLCENDLSNVKKAQELINKSKKPLFVLGSGAISQRKVLKLIAESNGIPVATTFNSKGIIAESNPLNL GMAGTRGTPRANYAIKNSDCIIALGARASERTFVALDEIEDKLIHVNINKKHLKGNYPIQGSVENFLYEVDFKKADWLDE LLEIDNKIAVEGLGDKTLPLRPQVAINEILNQYKDNIIIGDAGSHITWVTLLKKSSDFGQLLFQSALGPMGYGIPGAIGA AVANPDKKIIVINGDGDFQMNIQELATIKEYGLNILIFIINNSQYGIIRQHEVNKYDMEPYQIDLKNPDFVKVAEAYGLK AKRAEKLEDLQDVDDYDIVDVAVRFEDIPLPK >Mature_512_residues MNVAAYLVKILEEEGLENIFGLPGEQILPFYKALKDSKINHILVRHEQAAMHAADAYYKSSHKLSACVATAAPGALNFTM ALAGAYKDNVPLLVLTGDNPTDLRNEDVFQSLPTSEIFRNIVDETFNPLNGTEAVYALRAAIYKIRHDPKGPVHINLSND VLLSEEFQDFDLCYLCENDLSNVKKAQELINKSKKPLFVLGSGAISQRKVLKLIAESNGIPVATTFNSKGIIAESNPLNL GMAGTRGTPRANYAIKNSDCIIALGARASERTFVALDEIEDKLIHVNINKKHLKGNYPIQGSVENFLYEVDFKKADWLDE LLEIDNKIAVEGLGDKTLPLRPQVAINEILNQYKDNIIIGDAGSHITWVTLLKKSSDFGQLLFQSALGPMGYGIPGAIGA AVANPDKKIIVINGDGDFQMNIQELATIKEYGLNILIFIINNSQYGIIRQHEVNKYDMEPYQIDLKNPDFVKVAEAYGLK AKRAEKLEDLQDVDDYDIVDVAVRFEDIPLPK
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21361361, Length=516, Percent_Identity=24.2248062015504, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI93004078, Length=553, Percent_Identity=22.7848101265823, Blast_Score=118, Evalue=1e-26, Organism=Escherichia coli, GI1790104, Length=496, Percent_Identity=30.6451612903226, Blast_Score=238, Evalue=8e-64, Organism=Escherichia coli, GI87081685, Length=547, Percent_Identity=29.0676416819013, Blast_Score=219, Evalue=4e-58, Organism=Escherichia coli, GI1786717, Length=523, Percent_Identity=27.7246653919694, Blast_Score=183, Evalue=3e-47, Organism=Escherichia coli, GI1787096, Length=542, Percent_Identity=25.0922509225092, Blast_Score=141, Evalue=9e-35, Organism=Escherichia coli, GI1788716, Length=485, Percent_Identity=24.5360824742268, Blast_Score=86, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17531299, Length=484, Percent_Identity=25, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17531301, Length=484, Percent_Identity=25, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17542570, Length=543, Percent_Identity=22.4677716390424, Blast_Score=96, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6323755, Length=530, Percent_Identity=28.4905660377358, Blast_Score=216, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6320123, Length=505, Percent_Identity=23.7623762376238, Blast_Score=85, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6323163, Length=488, Percent_Identity=22.9508196721311, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI19922626, Length=546, Percent_Identity=23.0769230769231, Blast_Score=110, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 56672; Mature: 56672
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVAAYLVKILEEEGLENIFGLPGEQILPFYKALKDSKINHILVRHEQAAMHAADAYYKS CCHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHC SHKLSACVATAAPGALNFTMALAGAYKDNVPLLVLTGDNPTDLRNEDVFQSLPTSEIFRN CCCHHEEHHHCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHH IVDETFNPLNGTEAVYALRAAIYKIRHDPKGPVHINLSNDVLLSEEFQDFDLCYLCENDL HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCCCCEEEEECHHH SNVKKAQELINKSKKPLFVLGSGAISQRKVLKLIAESNGIPVATTFNSKGIIAESNPLNL HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCEE GMAGTRGTPRANYAIKNSDCIIALGARASERTFVALDEIEDKLIHVNINKKHLKGNYPIQ EECCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCEEEEEECCHHHCCCCCCCC GSVENFLYEVDFKKADWLDELLEIDNKIAVEGLGDKTLPLRPQVAINEILNQYKDNIIIG CCHHHEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEE DAGSHITWVTLLKKSSDFGQLLFQSALGPMGYGIPGAIGAAVANPDKKIIVINGDGDFQM CCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCEEE NIQELATIKEYGLNILIFIINNSQYGIIRQHEVNKYDMEPYQIDLKNPDFVKVAEAYGLK CHHHHHHHHHCCCEEEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCCEEEHHHHHCCC AKRAEKLEDLQDVDDYDIVDVAVRFEDIPLPK HHHHHHHHHHHCCCCCCEEEEEEEEECCCCCC >Mature Secondary Structure MNVAAYLVKILEEEGLENIFGLPGEQILPFYKALKDSKINHILVRHEQAAMHAADAYYKS CCHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHC SHKLSACVATAAPGALNFTMALAGAYKDNVPLLVLTGDNPTDLRNEDVFQSLPTSEIFRN CCCHHEEHHHCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHH IVDETFNPLNGTEAVYALRAAIYKIRHDPKGPVHINLSNDVLLSEEFQDFDLCYLCENDL HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCCCCEEEEECHHH SNVKKAQELINKSKKPLFVLGSGAISQRKVLKLIAESNGIPVATTFNSKGIIAESNPLNL HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCEE GMAGTRGTPRANYAIKNSDCIIALGARASERTFVALDEIEDKLIHVNINKKHLKGNYPIQ EECCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCEEEEEECCHHHCCCCCCCC GSVENFLYEVDFKKADWLDELLEIDNKIAVEGLGDKTLPLRPQVAINEILNQYKDNIIIG CCHHHEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEE DAGSHITWVTLLKKSSDFGQLLFQSALGPMGYGIPGAIGAAVANPDKKIIVINGDGDFQM CCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCEEE NIQELATIKEYGLNILIFIINNSQYGIIRQHEVNKYDMEPYQIDLKNPDFVKVAEAYGLK CHHHHHHHHHCCCEEEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCCEEEHHHHHCCC AKRAEKLEDLQDVDDYDIVDVAVRFEDIPLPK HHHHHHHHHHHCCCCCCEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]