| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642733
Identifier: 148642733
GI number: 148642733
Start: 649692
End: 650261
Strand: Reverse
Name: 148642733
Synonym: Msm_0673
Alternate gene names: NA
Gene position: 650261-649692 (Counterclockwise)
Preceding gene: 148642736
Following gene: 148642732
Centisome position: 35.09
GC content: 33.86
Gene sequence:
>570_bases TTGGGAGTTACTCCAATCAATTCAATTCCTTATGCAATAGCTTTAATTGCAAATATTGATGTGGGGCTTTCATCAGTTTT ATTTTATCTGGTAGTTATTTTTATACAAAAACCAATTTTGAAAGACAAGTATCATCCGAAAAGACTTCTTCAGCTTGTTA GTGCTTTTTTATTCGGATACTTTGTCGATTTTTCATTGGGGGTAATGGCACCGATTCAGAACCTTTCATTAATGGGCAAA TTTTTAATGCTTGCATTAAGCATAGTTCTTATAGCTGTAGGGATTTTAATAATGATGCCTGCAAATATTGCACCTCTTCC TGGAGAAGGTCTTATAGAGGCAATAGCCATAGCTGCAGATAGGAAATTCTCATCAGTTAAAATATGCATTGATTCATCAA TGGTGATAATAACAGTTATTTTATGCTGGATATTTTTAGGTGATGTTTTGGGAAGTGTAAGTGCAGGTACAATAATCTCG GCTGCATGTACAGGTTTTGTTGTAAGGCAGTTTCATGATTTGTACAGATATTTTACAGGTAAGGACATTAGAGTTGTTAA TAAGGAATAA
Upstream 100 bases:
>100_bases AAGAATTAAAATTACAAAAGAGTTAATTAAAAGAATAATATATTATATAATCGGTGTATGCATACTGTCTTTTGCAGTAG GGGTTTCAATCAAATCTGAA
Downstream 100 bases:
>100_bases AAAATATTAATAATTTGCAACTAAATTCATATGTAAAGGTGTTTTAAAATGGATTTTGGTCTTTGGGAAACTTACTATAG GAAAATATTGGATGATTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MGVTPINSIPYAIALIANIDVGLSSVLFYLVVIFIQKPILKDKYHPKRLLQLVSAFLFGYFVDFSLGVMAPIQNLSLMGK FLMLALSIVLIAVGILIMMPANIAPLPGEGLIEAIAIAADRKFSSVKICIDSSMVIITVILCWIFLGDVLGSVSAGTIIS AACTGFVVRQFHDLYRYFTGKDIRVVNKE
Sequences:
>Translated_189_residues MGVTPINSIPYAIALIANIDVGLSSVLFYLVVIFIQKPILKDKYHPKRLLQLVSAFLFGYFVDFSLGVMAPIQNLSLMGK FLMLALSIVLIAVGILIMMPANIAPLPGEGLIEAIAIAADRKFSSVKICIDSSMVIITVILCWIFLGDVLGSVSAGTIIS AACTGFVVRQFHDLYRYFTGKDIRVVNKE >Mature_188_residues GVTPINSIPYAIALIANIDVGLSSVLFYLVVIFIQKPILKDKYHPKRLLQLVSAFLFGYFVDFSLGVMAPIQNLSLMGKF LMLALSIVLIAVGILIMMPANIAPLPGEGLIEAIAIAADRKFSSVKICIDSSMVIITVILCWIFLGDVLGSVSAGTIISA ACTGFVVRQFHDLYRYFTGKDIRVVNKE
Specific function: Unknown
COG id: COG2364
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20586; Mature: 20455
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVTPINSIPYAIALIANIDVGLSSVLFYLVVIFIQKPILKDKYHPKRLLQLVSAFLFGY CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FVDFSLGVMAPIQNLSLMGKFLMLALSIVLIAVGILIMMPANIAPLPGEGLIEAIAIAAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC RKFSSVKICIDSSMVIITVILCWIFLGDVLGSVSAGTIISAACTGFVVRQFHDLYRYFTG CCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC KDIRVVNKE CCEEEECCC >Mature Secondary Structure GVTPINSIPYAIALIANIDVGLSSVLFYLVVIFIQKPILKDKYHPKRLLQLVSAFLFGY CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FVDFSLGVMAPIQNLSLMGKFLMLALSIVLIAVGILIMMPANIAPLPGEGLIEAIAIAAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC RKFSSVKICIDSSMVIITVILCWIFLGDVLGSVSAGTIISAACTGFVVRQFHDLYRYFTG CCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC KDIRVVNKE CCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA