| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642688
Identifier: 148642688
GI number: 148642688
Start: 608587
End: 609078
Strand: Reverse
Name: 148642688
Synonym: Msm_0628
Alternate gene names: NA
Gene position: 609078-608587 (Counterclockwise)
Preceding gene: 148642696
Following gene: 148642686
Centisome position: 32.87
GC content: 39.43
Gene sequence:
>492_bases TTGGATGAATCTGATGAGATTAGATATATTCTTATTGCTTCAGCATCAGGCGCATCAGCTTTGAAATTAGCAGATGCTAT TGAAGGGGATGCACAAATAATTAATGTAAGTCATCATGCCGGATTCAGCGGACCAAATGAAGTGGATATCTCCGATGAAA TGATTGACAAACTTGAAGAAAAAGGTGTTGACACTTTTATAGGGTCTCATGCATTTAGTGGGGTCGGTCGCGGAATCACT AATAAATTAGGAGGTATAAATCCTCCGGATATCATAGCAGATACTCTTCGTATGTTTTCACATGGGGTAAAAGTAGCTTG TGAAATCTCCATTATGGCTGCTGATGCGGGTTTAATTCCTGTTGATGAAGAAATCATAGCTATTGGTGGCCGTGCACAGG GTGTTGACACTGCAGTTGTTTTAACTCCTGCCAACATGACTAATGTTTTTGATTTGAATATTCATGAAATTATAGCTATG CCTCGCCAATAG
Upstream 100 bases:
>100_bases ACTGTAAAAAATTAAAAAACAAATAAGCCTATAAAATTTTACAGACTCAAAAGAAGGAGAAAATTACACTGATGAATTAA TTTCTCTTGTTAAACAAAGA
Downstream 100 bases:
>100_bases CTTCTTTTTATTTTTTATTTTTTTAATATGATGATGGTTAATGGTTAAATGGAATATGTGAAATAAGTAATTTTATAATA GATTATTTATTGGGTGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MDESDEIRYILIASASGASALKLADAIEGDAQIINVSHHAGFSGPNEVDISDEMIDKLEEKGVDTFIGSHAFSGVGRGIT NKLGGINPPDIIADTLRMFSHGVKVACEISIMAADAGLIPVDEEIIAIGGRAQGVDTAVVLTPANMTNVFDLNIHEIIAM PRQ
Sequences:
>Translated_163_residues MDESDEIRYILIASASGASALKLADAIEGDAQIINVSHHAGFSGPNEVDISDEMIDKLEEKGVDTFIGSHAFSGVGRGIT NKLGGINPPDIIADTLRMFSHGVKVACEISIMAADAGLIPVDEEIIAIGGRAQGVDTAVVLTPANMTNVFDLNIHEIIAM PRQ >Mature_163_residues MDESDEIRYILIASASGASALKLADAIEGDAQIINVSHHAGFSGPNEVDISDEMIDKLEEKGVDTFIGSHAFSGVGRGIT NKLGGINPPDIIADTLRMFSHGVKVACEISIMAADAGLIPVDEEIIAIGGRAQGVDTAVVLTPANMTNVFDLNIHEIIAM PRQ
Specific function: Unknown
COG id: COG1751
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015074 - InterPro: IPR023161 - InterPro: IPR015795 - ProDom: PD022619 [H]
Pfam domain/function: PF02887 PK_C [H]
EC number: NA
Molecular weight: Translated: 17139; Mature: 17139
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDESDEIRYILIASASGASALKLADAIEGDAQIINVSHHAGFSGPNEVDISDEMIDKLEE CCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHH KGVDTFIGSHAFSGVGRGITNKLGGINPPDIIADTLRMFSHGVKVACEISIMAADAGLIP CCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCC VDEEIIAIGGRAQGVDTAVVLTPANMTNVFDLNIHEIIAMPRQ CCCEEEEECCCCCCCCEEEEEECCCCCEEEECCHHHEEECCCC >Mature Secondary Structure MDESDEIRYILIASASGASALKLADAIEGDAQIINVSHHAGFSGPNEVDISDEMIDKLEE CCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHH KGVDTFIGSHAFSGVGRGITNKLGGINPPDIIADTLRMFSHGVKVACEISIMAADAGLIP CCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCC VDEEIIAIGGRAQGVDTAVVLTPANMTNVFDLNIHEIIAMPRQ CCCEEEEECCCCCCCCEEEEEECCCCCEEEECCHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]