| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642629
Identifier: 148642629
GI number: 148642629
Start: 544936
End: 545817
Strand: Reverse
Name: 148642629
Synonym: Msm_0569
Alternate gene names: NA
Gene position: 545817-544936 (Counterclockwise)
Preceding gene: 148642630
Following gene: 148642628
Centisome position: 29.45
GC content: 30.5
Gene sequence:
>882_bases ATGAGTAAAAAAAATAAAACATTGAAAGATATTTTAGATTGTATCTTATATGAAAACCCATCTACTCAAGATGAAATAGC TGAAAAACTGGGGATAACACGACGTTATGTTACTCAGCTGCTTCAGCCTCTTGTAAAGGAAGGAACTGTTAAAAGAGCAT ATATGATTGATTTAAATGTATATGAAAAATTAGCAGAATCCTTTGGAGATTATGCTCCAGTTAGTGATTCTGGATATATT TTAGTTAATGATATGCTGTCAAACATGGCTAAGCATGTTCAGTCTCAGTTACAGGAGTCATTTGATGCTGTTCAGGATTA TGATGAAAATAAAGCTAATCTTGCTTTAGAAATGGATTATACAACTAATAATATGGTTGAAAAAGTGAGAACTTCTGTTG AAACTATTGTTAGTATTAATCAGCATTCGGAATTATCTAAATCCATGCTTTATAATGAAGTAGCTTATGATTTGGAACGT ATTGGAGATTATTGTGGACATATTGCAAAGTTCGTAATTGAGGATGTTTATGAGGTTGATGAAGTTATTCTTAAAAATTT AAAGAAAATGCATAAAACTGCTCAAAAAATGATTAGGTCTGCGATGCTTGCATTTTTAGAAGGAAAAACTAATCTTAAGG ATGATATCATGGATTTTGAAGAATCTATGCATATGCTTCAAAATAAATCTATTAACATAATAGCCACTCAAATGGCTGAA AATTCATTTGATGAAAAAGAACGTTCTAATTATTTCATGTATCTATTTAGGGTTGTTAAAGCCTTTGAAAGGATAGGAGA TATTTCTATAGAGATTATTGATGTAGCTATTGAATTCCATAATAATATACCTAGGTCCACCACTCCTCGTACATTCAGAT AA
Upstream 100 bases:
>100_bases CAATAAAACATAGAGTCAGACGAAACCAAATAAACAAATCTTCTGAAAACATTCAATTTGAAACTAATGAGTTTTTAGAT GACTATAAAAAGTAGATATT
Downstream 100 bases:
>100_bases TTTTATTATTTTTTTTATTTTTCTATTTTTATTCACTTTTTAGGAATTTTAATTCATAAAATATCCTTTCGCTTAATGCC TTATTTTCACTAAATAGGAA
Product: phosphate transport system regulator-like protein, PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSKKNKTLKDILDCILYENPSTQDEIAEKLGITRRYVTQLLQPLVKEGTVKRAYMIDLNVYEKLAESFGDYAPVSDSGYI LVNDMLSNMAKHVQSQLQESFDAVQDYDENKANLALEMDYTTNNMVEKVRTSVETIVSINQHSELSKSMLYNEVAYDLER IGDYCGHIAKFVIEDVYEVDEVILKNLKKMHKTAQKMIRSAMLAFLEGKTNLKDDIMDFEESMHMLQNKSINIIATQMAE NSFDEKERSNYFMYLFRVVKAFERIGDISIEIIDVAIEFHNNIPRSTTPRTFR
Sequences:
>Translated_293_residues MSKKNKTLKDILDCILYENPSTQDEIAEKLGITRRYVTQLLQPLVKEGTVKRAYMIDLNVYEKLAESFGDYAPVSDSGYI LVNDMLSNMAKHVQSQLQESFDAVQDYDENKANLALEMDYTTNNMVEKVRTSVETIVSINQHSELSKSMLYNEVAYDLER IGDYCGHIAKFVIEDVYEVDEVILKNLKKMHKTAQKMIRSAMLAFLEGKTNLKDDIMDFEESMHMLQNKSINIIATQMAE NSFDEKERSNYFMYLFRVVKAFERIGDISIEIIDVAIEFHNNIPRSTTPRTFR >Mature_292_residues SKKNKTLKDILDCILYENPSTQDEIAEKLGITRRYVTQLLQPLVKEGTVKRAYMIDLNVYEKLAESFGDYAPVSDSGYIL VNDMLSNMAKHVQSQLQESFDAVQDYDENKANLALEMDYTTNNMVEKVRTSVETIVSINQHSELSKSMLYNEVAYDLERI GDYCGHIAKFVIEDVYEVDEVILKNLKKMHKTAQKMIRSAMLAFLEGKTNLKDDIMDFEESMHMLQNKSINIIATQMAEN SFDEKERSNYFMYLFRVVKAFERIGDISIEIIDVAIEFHNNIPRSTTPRTFR
Specific function: Unknown
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 - InterPro: IPR011991 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 33915; Mature: 33784
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKNKTLKDILDCILYENPSTQDEIAEKLGITRRYVTQLLQPLVKEGTVKRAYMIDLNV CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHEEEEHHH YEKLAESFGDYAPVSDSGYILVNDMLSNMAKHVQSQLQESFDAVQDYDENKANLALEMDY HHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC TTNNMVEKVRTSVETIVSINQHSELSKSMLYNEVAYDLERIGDYCGHIAKFVIEDVYEVD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVILKNLKKMHKTAQKMIRSAMLAFLEGKTNLKDDIMDFEESMHMLQNKSINIIATQMAE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHH NSFDEKERSNYFMYLFRVVKAFERIGDISIEIIDVAIEFHNNIPRSTTPRTFR CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SKKNKTLKDILDCILYENPSTQDEIAEKLGITRRYVTQLLQPLVKEGTVKRAYMIDLNV CCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHEEEEHHH YEKLAESFGDYAPVSDSGYILVNDMLSNMAKHVQSQLQESFDAVQDYDENKANLALEMDY HHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC TTNNMVEKVRTSVETIVSINQHSELSKSMLYNEVAYDLERIGDYCGHIAKFVIEDVYEVD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVILKNLKKMHKTAQKMIRSAMLAFLEGKTNLKDDIMDFEESMHMLQNKSINIIATQMAE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHH NSFDEKERSNYFMYLFRVVKAFERIGDISIEIIDVAIEFHNNIPRSTTPRTFR CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]