| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is pstS1 [H]
Identifier: 148642628
GI number: 148642628
Start: 543963
End: 544772
Strand: Reverse
Name: pstS1 [H]
Synonym: Msm_0568
Alternate gene names: 148642628
Gene position: 544772-543963 (Counterclockwise)
Preceding gene: 148642629
Following gene: 148642627
Centisome position: 29.4
GC content: 34.57
Gene sequence:
>810_bases ATGAAAAAGAAAAATAAATATTTAATTGGTATTATAGCAATTATTGTTATAATTGCAGGTGCTTTGATTATTTCTGCAGA TGCAGGATCATCAAAGGTTCAAGTGGCAGGTTCAACCTCAGTTCAGCCTGTTGCTGAAAAGTTAGTCGAAGTTTATAAAG AATCTCATCCTGATGCTCAAATCAATGTGCAAGGTGGAGGATCTAGTGTAGGTATCAAAAGTGCTGAAGACGGATCTGCT GATATTGGTATGTGTTCAAAAGCTTTAGACAATAACAGTTCCTTACAGCAATATGAATTGGGAAAAGACGGAATTGTAAT TGCAATCAATACTCAAAACCAAGTTTCAGATTTATCTGATGAACAGATTCAAGGAATTTTCTCTGGTAAAATTACCAACT GGAATCAAGTAGGTGGAAGTGATGGAGAAATAAACGTCATCACACGTGAAGAAGGTTCAGGTACTTTAGATGCATTTGAA AGTATTGTTATGGGAGACAGTAAAATCAAAGATGATGCTGTTGTTCAAAGTTCTACTGAAGCAGTAAAACAATCAGTTTC CCAAGATCCTAATGCAATTGGTTTTGTATCTTATGCTCATATGAGTGATGATATTAAAGCAGTTAATGTTAATGGAGTTG CACCATCTGATGCTACTATTGCTGATGGTACATACGAACTTCAAAGACCATTTTTATTCTTAACTAATGGTGAACCTACT GGCGAAACTAAAAACTTCATTGATTGGGTTTTAAGTGATGACGGTGGTAAAGTATTGGCTGATGAAAAAATTATTAAAAC TTCAAAATAG
Upstream 100 bases:
>100_bases TCCTTTCGCTTAATGCCTTATTTTCACTAAATAGGAACAATAATTCACAAAAAGTAACATTTATATACTGCTTTGTTAAG ATAGTTATGTGAGGAGAAAA
Downstream 100 bases:
>100_bases ATTCATAGTGGTTTGATGGAAACTAAAAACATTAATGAATTTTTTATTGAGAAAGGATTGTTTATAACAGCAATCTTTTC CATTCTTGTTATTTTTACAA
Product: phosphate ABC transporter, phosphate-binding component, PstS
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP 1 [H]
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MKKKNKYLIGIIAIIVIIAGALIISADAGSSKVQVAGSTSVQPVAEKLVEVYKESHPDAQINVQGGGSSVGIKSAEDGSA DIGMCSKALDNNSSLQQYELGKDGIVIAINTQNQVSDLSDEQIQGIFSGKITNWNQVGGSDGEINVITREEGSGTLDAFE SIVMGDSKIKDDAVVQSSTEAVKQSVSQDPNAIGFVSYAHMSDDIKAVNVNGVAPSDATIADGTYELQRPFLFLTNGEPT GETKNFIDWVLSDDGGKVLADEKIIKTSK
Sequences:
>Translated_269_residues MKKKNKYLIGIIAIIVIIAGALIISADAGSSKVQVAGSTSVQPVAEKLVEVYKESHPDAQINVQGGGSSVGIKSAEDGSA DIGMCSKALDNNSSLQQYELGKDGIVIAINTQNQVSDLSDEQIQGIFSGKITNWNQVGGSDGEINVITREEGSGTLDAFE SIVMGDSKIKDDAVVQSSTEAVKQSVSQDPNAIGFVSYAHMSDDIKAVNVNGVAPSDATIADGTYELQRPFLFLTNGEPT GETKNFIDWVLSDDGGKVLADEKIIKTSK >Mature_269_residues MKKKNKYLIGIIAIIVIIAGALIISADAGSSKVQVAGSTSVQPVAEKLVEVYKESHPDAQINVQGGGSSVGIKSAEDGSA DIGMCSKALDNNSSLQQYELGKDGIVIAINTQNQVSDLSDEQIQGIFSGKITNWNQVGGSDGEINVITREEGSGTLDAFE SIVMGDSKIKDDAVVQSSTEAVKQSVSQDPNAIGFVSYAHMSDDIKAVNVNGVAPSDATIADGTYELQRPFLFLTNGEPT GETKNFIDWVLSDDGGKVLADEKIIKTSK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28300; Mature: 28300
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKNKYLIGIIAIIVIIAGALIISADAGSSKVQVAGSTSVQPVAEKLVEVYKESHPDAQ CCCCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCE INVQGGGSSVGIKSAEDGSADIGMCSKALDNNSSLQQYELGKDGIVIAINTQNQVSDLSD EEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCEEEEEECCHHHHCCCH EQIQGIFSGKITNWNQVGGSDGEINVITREEGSGTLDAFESIVMGDSKIKDDAVVQSSTE HHHHHHHCCCCCCCHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH AVKQSVSQDPNAIGFVSYAHMSDDIKAVNVNGVAPSDATIADGTYELQRPFLFLTNGEPT HHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCEEECCEEEECCCEEEEECCCCC GETKNFIDWVLSDDGGKVLADEKIIKTSK CCCCCEEEEEEECCCCEEEECCEEECCCC >Mature Secondary Structure MKKKNKYLIGIIAIIVIIAGALIISADAGSSKVQVAGSTSVQPVAEKLVEVYKESHPDAQ CCCCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCE INVQGGGSSVGIKSAEDGSADIGMCSKALDNNSSLQQYELGKDGIVIAINTQNQVSDLSD EEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCEEEEEECCHHHHCCCH EQIQGIFSGKITNWNQVGGSDGEINVITREEGSGTLDAFESIVMGDSKIKDDAVVQSSTE HHHHHHHCCCCCCCHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH AVKQSVSQDPNAIGFVSYAHMSDDIKAVNVNGVAPSDATIADGTYELQRPFLFLTNGEPT HHHHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCCCCEEECCEEEECCCEEEEECCCCC GETKNFIDWVLSDDGGKVLADEKIIKTSK CCCCCEEEEEEECCCCEEEECCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]