| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642579
Identifier: 148642579
GI number: 148642579
Start: 491091
End: 491642
Strand: Reverse
Name: 148642579
Synonym: Msm_0519
Alternate gene names: NA
Gene position: 491642-491091 (Counterclockwise)
Preceding gene: 148642580
Following gene: 148642569
Centisome position: 26.53
GC content: 30.62
Gene sequence:
>552_bases ATGAGCGAAGTCTTAAACAATGTAGTAAATGTAATAAGTGGTTTGGATGGTGTTTTGGAAGTAAGGCAACTTTCCAATGA TGATATTTTAAAGATAATTGATATGGAAGCACAGCGCTCAAAGGATATAGTTCCGGTATTCAATGAAGGAGTTCAGGAAT GTTTCAAAAGGGATGTATGTTTTGTAATTTTTAAAAAAGGATATTTCAGAGTTCCCCCAACTCCCACTGTTTTACTGACA TTTGACGGAGAAATATTGGGTCATGATGTTTTTGATCCTGAAGATAAGAAAAAATTTAGGGATGATGAAGATATCATGTT TTTAAGTGATGATTTTGTAATTTTTAAAGATGTATTAAATAATTACAATTTGGAAAAAGGCAATGAATATTTTGTTTTAC CTCCCGTTCCATTTCCGGAATTGGATCCTTTTAAGTTAGATGGTGTTGTTTCATCAAGTCCGTCAACTAAATCTGACGAA TATTTAAAAAATAAGTATAGTTATGGTGATGATTCTTCAATAGCTACAATTATTGTTTCATTTAATATTTAA
Upstream 100 bases:
>100_bases ATAATTGATGCAAGTACTGGAGTAAATAAAGTATCAACAGATATTAAAAAAGCTGTAGCTCCGTATATGGGTATTTGTCC TGATTGTATTAGGTGATATT
Downstream 100 bases:
>100_bases ATATTAAAATATTCATTTCTAGCTTCAACTAGTGCTTTAACATTAGCTAGTGGTGTTTTTGGAGCTAATCCACAACTTGG AGCTATAATATCAATATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSEVLNNVVNVISGLDGVLEVRQLSNDDILKIIDMEAQRSKDIVPVFNEGVQECFKRDVCFVIFKKGYFRVPPTPTVLLT FDGEILGHDVFDPEDKKKFRDDEDIMFLSDDFVIFKDVLNNYNLEKGNEYFVLPPVPFPELDPFKLDGVVSSSPSTKSDE YLKNKYSYGDDSSIATIIVSFNI
Sequences:
>Translated_183_residues MSEVLNNVVNVISGLDGVLEVRQLSNDDILKIIDMEAQRSKDIVPVFNEGVQECFKRDVCFVIFKKGYFRVPPTPTVLLT FDGEILGHDVFDPEDKKKFRDDEDIMFLSDDFVIFKDVLNNYNLEKGNEYFVLPPVPFPELDPFKLDGVVSSSPSTKSDE YLKNKYSYGDDSSIATIIVSFNI >Mature_182_residues SEVLNNVVNVISGLDGVLEVRQLSNDDILKIIDMEAQRSKDIVPVFNEGVQECFKRDVCFVIFKKGYFRVPPTPTVLLTF DGEILGHDVFDPEDKKKFRDDEDIMFLSDDFVIFKDVLNNYNLEKGNEYFVLPPVPFPELDPFKLDGVVSSSPSTKSDEY LKNKYSYGDDSSIATIIVSFNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20822; Mature: 20691
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVLNNVVNVISGLDGVLEVRQLSNDDILKIIDMEAQRSKDIVPVFNEGVQECFKRDVC CHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCHHCCCCCCHHHHHHHHHHHHCCEE FVIFKKGYFRVPPTPTVLLTFDGEILGHDVFDPEDKKKFRDDEDIMFLSDDFVIFKDVLN EEEEECCEEECCCCCEEEEEECCCEECCCCCCCCHHHHCCCCCCEEEEECCHHHHHHHHC NYNLEKGNEYFVLPPVPFPELDPFKLDGVVSSSPSTKSDEYLKNKYSYGDDSSIATIIVS CCCCCCCCEEEEECCCCCCCCCCEEECCEECCCCCCCCHHHHHHCCCCCCCCCEEEEEEE FNI ECC >Mature Secondary Structure SEVLNNVVNVISGLDGVLEVRQLSNDDILKIIDMEAQRSKDIVPVFNEGVQECFKRDVC HHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCHHCCCCCCHHHHHHHHHHHHCCEE FVIFKKGYFRVPPTPTVLLTFDGEILGHDVFDPEDKKKFRDDEDIMFLSDDFVIFKDVLN EEEEECCEEECCCCCEEEEEECCCEECCCCCCCCHHHHCCCCCCEEEEECCHHHHHHHHC NYNLEKGNEYFVLPPVPFPELDPFKLDGVVSSSPSTKSDEYLKNKYSYGDDSSIATIIVS CCCCCCCCEEEEECCCCCCCCCCEEECCEECCCCCCCCHHHHHHCCCCCCCCCEEEEEEE FNI ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA