Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

Click here to switch to the map view.

The map label for this gene is 148642543

Identifier: 148642543

GI number: 148642543

Start: 456770

End: 457234

Strand: Reverse

Name: 148642543

Synonym: Msm_0483

Alternate gene names: NA

Gene position: 457234-456770 (Counterclockwise)

Preceding gene: 148642544

Following gene: 148642532

Centisome position: 24.67

GC content: 29.46

Gene sequence:

>465_bases
ATGGCTCTTAATCCAGTTTTGGTAATAAAAGTTATGGATGGGAATTCTGTTGGTGTTAGAGCAAGACTTAAAGATGATTA
TGTTGAACATGAAATTGTCTTGAATTCAGTACTTGCTTATTACTGGGCCAATGATTTCCCTCCTGTTGTAAAATTTTTAG
AACTTTTTGAATCTGTTATAAAAAGAACCATTAATGAGCTAATGCCTCATAAAAACTTAAATTTAAAATATGAAGTTAAG
GCAGATGCAAAACTTGAAGATGCATCTGAAATAGAAATTAATTTGATTGAAGTTGAAGCTGATGGTGTTGGCTTTAAAAT
TGACGGAAAACAATTAGTTCTTCAGGGCTTTAGAAACACTGATAATCCTGAAGAAAAAAATTACACATTCGCTGAAAGTT
TTGATAAAAATATAGAAACGCCTGATATTGTTTTAAAAAAATATGAAGAAATGAAAAACAAATAA

Upstream 100 bases:

>100_bases
ATATTGAACAAATTCCAGTTATTGGTGTGGAAGGAGAGTTAATAGGGCTTGTAAGAGCTAGTGATTTAATTAAAGCTTTA
GTGGATTAAGTGTGGTGTAT

Downstream 100 bases:

>100_bases
GTTTTATACATTTCTTCTTATATCTGGCAATAATTCCATAAACTTATTTAAACATTCTTCTTCTGACTGGAAGTTATTAC
CTTTAATTAATCCGTTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MALNPVLVIKVMDGNSVGVRARLKDDYVEHEIVLNSVLAYYWANDFPPVVKFLELFESVIKRTINELMPHKNLNLKYEVK
ADAKLEDASEIEINLIEVEADGVGFKIDGKQLVLQGFRNTDNPEEKNYTFAESFDKNIETPDIVLKKYEEMKNK

Sequences:

>Translated_154_residues
MALNPVLVIKVMDGNSVGVRARLKDDYVEHEIVLNSVLAYYWANDFPPVVKFLELFESVIKRTINELMPHKNLNLKYEVK
ADAKLEDASEIEINLIEVEADGVGFKIDGKQLVLQGFRNTDNPEEKNYTFAESFDKNIETPDIVLKKYEEMKNK
>Mature_153_residues
ALNPVLVIKVMDGNSVGVRARLKDDYVEHEIVLNSVLAYYWANDFPPVVKFLELFESVIKRTINELMPHKNLNLKYEVKA
DAKLEDASEIEINLIEVEADGVGFKIDGKQLVLQGFRNTDNPEEKNYTFAESFDKNIETPDIVLKKYEEMKNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17708; Mature: 17577

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNPVLVIKVMDGNSVGVRARLKDDYVEHEIVLNSVLAYYWANDFPPVVKFLELFESVI
CCCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KRTINELMPHKNLNLKYEVKADAKLEDASEIEINLIEVEADGVGFKIDGKQLVLQGFRNT
HHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEECCHHHHEECCCCC
DNPEEKNYTFAESFDKNIETPDIVLKKYEEMKNK
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALNPVLVIKVMDGNSVGVRARLKDDYVEHEIVLNSVLAYYWANDFPPVVKFLELFESVI
CCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KRTINELMPHKNLNLKYEVKADAKLEDASEIEINLIEVEADGVGFKIDGKQLVLQGFRNT
HHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEECCHHHHEECCCCC
DNPEEKNYTFAESFDKNIETPDIVLKKYEEMKNK
CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA