| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642543
Identifier: 148642543
GI number: 148642543
Start: 456770
End: 457234
Strand: Reverse
Name: 148642543
Synonym: Msm_0483
Alternate gene names: NA
Gene position: 457234-456770 (Counterclockwise)
Preceding gene: 148642544
Following gene: 148642532
Centisome position: 24.67
GC content: 29.46
Gene sequence:
>465_bases ATGGCTCTTAATCCAGTTTTGGTAATAAAAGTTATGGATGGGAATTCTGTTGGTGTTAGAGCAAGACTTAAAGATGATTA TGTTGAACATGAAATTGTCTTGAATTCAGTACTTGCTTATTACTGGGCCAATGATTTCCCTCCTGTTGTAAAATTTTTAG AACTTTTTGAATCTGTTATAAAAAGAACCATTAATGAGCTAATGCCTCATAAAAACTTAAATTTAAAATATGAAGTTAAG GCAGATGCAAAACTTGAAGATGCATCTGAAATAGAAATTAATTTGATTGAAGTTGAAGCTGATGGTGTTGGCTTTAAAAT TGACGGAAAACAATTAGTTCTTCAGGGCTTTAGAAACACTGATAATCCTGAAGAAAAAAATTACACATTCGCTGAAAGTT TTGATAAAAATATAGAAACGCCTGATATTGTTTTAAAAAAATATGAAGAAATGAAAAACAAATAA
Upstream 100 bases:
>100_bases ATATTGAACAAATTCCAGTTATTGGTGTGGAAGGAGAGTTAATAGGGCTTGTAAGAGCTAGTGATTTAATTAAAGCTTTA GTGGATTAAGTGTGGTGTAT
Downstream 100 bases:
>100_bases GTTTTATACATTTCTTCTTATATCTGGCAATAATTCCATAAACTTATTTAAACATTCTTCTTCTGACTGGAAGTTATTAC CTTTAATTAATCCGTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MALNPVLVIKVMDGNSVGVRARLKDDYVEHEIVLNSVLAYYWANDFPPVVKFLELFESVIKRTINELMPHKNLNLKYEVK ADAKLEDASEIEINLIEVEADGVGFKIDGKQLVLQGFRNTDNPEEKNYTFAESFDKNIETPDIVLKKYEEMKNK
Sequences:
>Translated_154_residues MALNPVLVIKVMDGNSVGVRARLKDDYVEHEIVLNSVLAYYWANDFPPVVKFLELFESVIKRTINELMPHKNLNLKYEVK ADAKLEDASEIEINLIEVEADGVGFKIDGKQLVLQGFRNTDNPEEKNYTFAESFDKNIETPDIVLKKYEEMKNK >Mature_153_residues ALNPVLVIKVMDGNSVGVRARLKDDYVEHEIVLNSVLAYYWANDFPPVVKFLELFESVIKRTINELMPHKNLNLKYEVKA DAKLEDASEIEINLIEVEADGVGFKIDGKQLVLQGFRNTDNPEEKNYTFAESFDKNIETPDIVLKKYEEMKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17708; Mature: 17577
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNPVLVIKVMDGNSVGVRARLKDDYVEHEIVLNSVLAYYWANDFPPVVKFLELFESVI CCCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH KRTINELMPHKNLNLKYEVKADAKLEDASEIEINLIEVEADGVGFKIDGKQLVLQGFRNT HHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEECCHHHHEECCCCC DNPEEKNYTFAESFDKNIETPDIVLKKYEEMKNK CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure ALNPVLVIKVMDGNSVGVRARLKDDYVEHEIVLNSVLAYYWANDFPPVVKFLELFESVI CCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH KRTINELMPHKNLNLKYEVKADAKLEDASEIEINLIEVEADGVGFKIDGKQLVLQGFRNT HHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEECCHHHHEECCCCC DNPEEKNYTFAESFDKNIETPDIVLKKYEEMKNK CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA