Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642502

Identifier: 148642502

GI number: 148642502

Start: 422917

End: 423264

Strand: Reverse

Name: 148642502

Synonym: Msm_0442

Alternate gene names: NA

Gene position: 423264-422917 (Counterclockwise)

Preceding gene: 148642504

Following gene: 148642501

Centisome position: 22.84

GC content: 28.45

Gene sequence:

>348_bases
ATGATTAAAGTTAAAAATATTAAATTATTGGGAATTCTGTTAGCTGTTCTGGTAATATTTTTAGGAGTTCGTCCTTTATT
TACTCAGACAATAACTAATGACAGTATAGCTAGTGCAATTATTTTAGTTTTAATTGGAATTGCTTATATTGTTATTGTTG
CTAAACCGCAATGGGCTAAGGCAGTTTTCTTTTTTGAAGGAATTATTATTGGAATAAGCGGTTATACTTTACTTGCTACT
CCGTATAACTATTTGTTGGGTATTATTGGTCTTGCTATTGTTGTAATAGCTGTATTGGCATATCTGCAAAAATTACCTAT
GAGTATTTTAAAATATTTTTATAGGTAA

Upstream 100 bases:

>100_bases
TGTTGTTAATAGTCCATACGCTTCTGTCCATTTTCATCACCTTTATCTACTATTATATTTTATTATAATATAAATATTAT
AAAGTTTAAAAGAAATAATC

Downstream 100 bases:

>100_bases
CTCCTCTTTTTTTTAACATTTCACATGTTCATGGCACCGTTATCTGACTGTATAAAATTTTACTTTTAAAATTAAACATT
GCTCAATATATGCTATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MIKVKNIKLLGILLAVLVIFLGVRPLFTQTITNDSIASAIILVLIGIAYIVIVAKPQWAKAVFFFEGIIIGISGYTLLAT
PYNYLLGIIGLAIVVIAVLAYLQKLPMSILKYFYR

Sequences:

>Translated_115_residues
MIKVKNIKLLGILLAVLVIFLGVRPLFTQTITNDSIASAIILVLIGIAYIVIVAKPQWAKAVFFFEGIIIGISGYTLLAT
PYNYLLGIIGLAIVVIAVLAYLQKLPMSILKYFYR
>Mature_115_residues
MIKVKNIKLLGILLAVLVIFLGVRPLFTQTITNDSIASAIILVLIGIAYIVIVAKPQWAKAVFFFEGIIIGISGYTLLAT
PYNYLLGIIGLAIVVIAVLAYLQKLPMSILKYFYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12657; Mature: 12657

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVKNIKLLGILLAVLVIFLGVRPLFTQTITNDSIASAIILVLIGIAYIVIVAKPQWAK
CCEECHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
AVFFFEGIIIGISGYTLLATPYNYLLGIIGLAIVVIAVLAYLQKLPMSILKYFYR
HHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MIKVKNIKLLGILLAVLVIFLGVRPLFTQTITNDSIASAIILVLIGIAYIVIVAKPQWAK
CCEECHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
AVFFFEGIIIGISGYTLLATPYNYLLGIIGLAIVVIAVLAYLQKLPMSILKYFYR
HHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA