| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642464
Identifier: 148642464
GI number: 148642464
Start: 385776
End: 386567
Strand: Reverse
Name: 148642464
Synonym: Msm_0404
Alternate gene names: NA
Gene position: 386567-385776 (Counterclockwise)
Preceding gene: 148642466
Following gene: 148642461
Centisome position: 20.86
GC content: 27.15
Gene sequence:
>792_bases GTGAATGAAAATCAAGAATGCATGGAAAACTATGAAACAATATCTGAAGAAATTAAATATATAACAAACTCTTTAGTAAG GTTGAAAATTTTGGCAACTTTATATGAACAGCCATTGAACATGAAAGACATTAATAGAACTACAGGATTAAGTTACAGCT CAATATCCAGTAACATGTTTGGACTGGAACTGGGAGGATTTATTTATAGAAGCGGAAATTTGTATCATATCTCAAATACA ACTGAACTATATGTGTCTAATATTTTGGAATTAAAGGATACAATAAATCTATTTAATAAGTTTTTTAATATTCTGGATGC TCATATTGTAGATTTGATTCCTGAAAAATCAGTAGCTCAATTATATCTGCTTGGTAGAGCTATTTTAGTTGAATCTAATG AAAAGGATGTTTATAGAACATATAATATAATTCAACATGCGTTAAATGAAGCTTCCAGTTTAAAATGTGTTCTTCCCTTT TTCTATGGGGATTTTAATAAATATATAAATGATTTAATTGATGAGGGCAGCCATATTGAATTAATAATTCCCAAAAACAT TAAAGAGAACTTTGAATATTTCTTAAATCTGGAAAATGACAATGTGGATTTAACTGCTTTTAATATTGAAAATGCTTTCT TATTGGTTGTAACTGATAAAGTAATGATTCTTGGCCTTTTTAAGGAAGACGGAAATTTTGACCAAAACAGAATAATAACT TCTAAAAAAGAGGAATGCATTAAATGGGGTGAAAATTTATTTGAAAACTTTAAAAATAAGATTAATAAATGA
Upstream 100 bases:
>100_bases TTTCTTATGTGTTATTTTACACATCTGCTCACTTTGAGAGTTTTTATATTTTTTTAGTATTAAAAATACCTTTGCCAGTA ATACTTTTTTGGTGATACCT
Downstream 100 bases:
>100_bases GTATTTTTTACTCATTTATAATATTCTTCCAAATAATCTTTTATTTCATCAATAGCTATTCTTTCCTGAGCTTCACTGTC TCTGTTTCTTACAGTTACTT
Product: transcriptional regulator
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MNENQECMENYETISEEIKYITNSLVRLKILATLYEQPLNMKDINRTTGLSYSSISSNMFGLELGGFIYRSGNLYHISNT TELYVSNILELKDTINLFNKFFNILDAHIVDLIPEKSVAQLYLLGRAILVESNEKDVYRTYNIIQHALNEASSLKCVLPF FYGDFNKYINDLIDEGSHIELIIPKNIKENFEYFLNLENDNVDLTAFNIENAFLLVVTDKVMILGLFKEDGNFDQNRIIT SKKEECIKWGENLFENFKNKINK
Sequences:
>Translated_263_residues MNENQECMENYETISEEIKYITNSLVRLKILATLYEQPLNMKDINRTTGLSYSSISSNMFGLELGGFIYRSGNLYHISNT TELYVSNILELKDTINLFNKFFNILDAHIVDLIPEKSVAQLYLLGRAILVESNEKDVYRTYNIIQHALNEASSLKCVLPF FYGDFNKYINDLIDEGSHIELIIPKNIKENFEYFLNLENDNVDLTAFNIENAFLLVVTDKVMILGLFKEDGNFDQNRIIT SKKEECIKWGENLFENFKNKINK >Mature_263_residues MNENQECMENYETISEEIKYITNSLVRLKILATLYEQPLNMKDINRTTGLSYSSISSNMFGLELGGFIYRSGNLYHISNT TELYVSNILELKDTINLFNKFFNILDAHIVDLIPEKSVAQLYLLGRAILVESNEKDVYRTYNIIQHALNEASSLKCVLPF FYGDFNKYINDLIDEGSHIELIIPKNIKENFEYFLNLENDNVDLTAFNIENAFLLVVTDKVMILGLFKEDGNFDQNRIIT SKKEECIKWGENLFENFKNKINK
Specific function: Unknown
COG id: COG4742
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30540; Mature: 30540
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENQECMENYETISEEIKYITNSLVRLKILATLYEQPLNMKDINRTTGLSYSSISSNMF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHCCCCHHHHCCCCC GLELGGFIYRSGNLYHISNTTELYVSNILELKDTINLFNKFFNILDAHIVDLIPEKSVAQ EEEECCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LYLLGRAILVESNEKDVYRTYNIIQHALNEASSLKCVLPFFYGDFNKYINDLIDEGSHIE HHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEE LIIPKNIKENFEYFLNLENDNVDLTAFNIENAFLLVVTDKVMILGLFKEDGNFDQNRIIT EEECCCCCCCHHEEEEECCCCEEEEEEEECCEEEEEEECCEEEEEEECCCCCCCCCCEEC SKKEECIKWGENLFENFKNKINK CCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNENQECMENYETISEEIKYITNSLVRLKILATLYEQPLNMKDINRTTGLSYSSISSNMF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHCCCCHHHHCCCCC GLELGGFIYRSGNLYHISNTTELYVSNILELKDTINLFNKFFNILDAHIVDLIPEKSVAQ EEEECCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LYLLGRAILVESNEKDVYRTYNIIQHALNEASSLKCVLPFFYGDFNKYINDLIDEGSHIE HHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEE LIIPKNIKENFEYFLNLENDNVDLTAFNIENAFLLVVTDKVMILGLFKEDGNFDQNRIIT EEECCCCCCCHHEEEEECCCCEEEEEEEECCEEEEEEECCEEEEEEECCCCCCCCCCEEC SKKEECIKWGENLFENFKNKINK CCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA