| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642442
Identifier: 148642442
GI number: 148642442
Start: 363081
End: 364106
Strand: Reverse
Name: 148642442
Synonym: Msm_0382
Alternate gene names: NA
Gene position: 364106-363081 (Counterclockwise)
Preceding gene: 148642443
Following gene: 148642441
Centisome position: 19.65
GC content: 33.14
Gene sequence:
>1026_bases GTGAAAGTTGTTGTTGATGCTTCAAATGTTGCATATAGTACAAAAAATGAAAATTCACAGCCTCAAATGTCCAATATTTT AGCTGCGGTTAAATCTTTAGAAGAAAGTGGTGATGAATTTGTAATAATTGCTGATGCATCACTACGTCATGACATTGATG ATAAAGAAAAATTTGAAAAACTGTTGGAAAGTGAAAATGTAGAGGAAGTTCCGGCAGGTAATGATGCTGATCATTTTATT CTCAATATAGCCCATAATGAAAAAGCTAAAATTTTATCTAATGACAAATTCAGAGACTATGCTGCTGAATTTAAAAATAT TAATTCTATGAGGATTCCTTTTGTAATAGAAAATGGCAGAGTTACATTTGGGAAACCTAAATCACCTAAAAAGGATAAAA ACATTTTGCAGCACATATCTGATGAGATTATCAAAGAATTAAACTTCAAAAGATGGGAAGTTTATACCGGAAAAGAAGGT TTGGAAATTTCACCATTAAACATTGCTAAACAGGCAATTATCCGTATAGATAATGATAATGACACCAGTTCTAAATTAGA AAAGGTCTTTTCAAAAATACCTATGTTTAACAAGATTGTGGACATGGTTGATGATGTGGAAGTGGCTGCTCCTTATGTTA TTTTCGTATTGGTCCATCCAAAGGATTACAAATTAGCTGTTAAAAATGCAGGTAATATTTCTGTTACTGTTGCTGACAGG TTAAGACTTGAGAAAAAACCATTGATAGCTGTTCGTAATGATTTATTTACCAGACCTGGCACTTTTGAGTTAAATATAAT GCTGGCTGATGAAGTTACAGAACATGCTCCTTATAATGTTTTGGTTCGCGTAAGTACTCATGATGAAGTATTCATTAAGA AAAATTCAAGAAACATTGCCAGCACTATAGCCGGAAGGCTCGGATCTTGGAAATTTCCATTTGTTTCTGTTAAACCAGAT ATGCTTTTGGAGAAACCTGGAGATTTTGAGATTGAGCTAGAAAAAGGAGGAAGTTTGGATGGTTAA
Upstream 100 bases:
>100_bases GAGAATATCCGAGAAATAGCATTTAGTTAACTCTTAATTAAATTTAAATATACAATTTACAAATAATATAATATTAATTA AATAGATTTTAGGTGATAAT
Downstream 100 bases:
>100_bases TAGCTTAACTAAAGAACTTATTAAGCTATCTACAAAACTTAATCCAATTAGTGTTGGAACTAAGTTTTTTCCAACAAATT CTGTTGAAACAGAGTATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKVVVDASNVAYSTKNENSQPQMSNILAAVKSLEESGDEFVIIADASLRHDIDDKEKFEKLLESENVEEVPAGNDADHFI LNIAHNEKAKILSNDKFRDYAAEFKNINSMRIPFVIENGRVTFGKPKSPKKDKNILQHISDEIIKELNFKRWEVYTGKEG LEISPLNIAKQAIIRIDNDNDTSSKLEKVFSKIPMFNKIVDMVDDVEVAAPYVIFVLVHPKDYKLAVKNAGNISVTVADR LRLEKKPLIAVRNDLFTRPGTFELNIMLADEVTEHAPYNVLVRVSTHDEVFIKKNSRNIASTIAGRLGSWKFPFVSVKPD MLLEKPGDFEIELEKGGSLDG
Sequences:
>Translated_341_residues MKVVVDASNVAYSTKNENSQPQMSNILAAVKSLEESGDEFVIIADASLRHDIDDKEKFEKLLESENVEEVPAGNDADHFI LNIAHNEKAKILSNDKFRDYAAEFKNINSMRIPFVIENGRVTFGKPKSPKKDKNILQHISDEIIKELNFKRWEVYTGKEG LEISPLNIAKQAIIRIDNDNDTSSKLEKVFSKIPMFNKIVDMVDDVEVAAPYVIFVLVHPKDYKLAVKNAGNISVTVADR LRLEKKPLIAVRNDLFTRPGTFELNIMLADEVTEHAPYNVLVRVSTHDEVFIKKNSRNIASTIAGRLGSWKFPFVSVKPD MLLEKPGDFEIELEKGGSLDG >Mature_341_residues MKVVVDASNVAYSTKNENSQPQMSNILAAVKSLEESGDEFVIIADASLRHDIDDKEKFEKLLESENVEEVPAGNDADHFI LNIAHNEKAKILSNDKFRDYAAEFKNINSMRIPFVIENGRVTFGKPKSPKKDKNILQHISDEIIKELNFKRWEVYTGKEG LEISPLNIAKQAIIRIDNDNDTSSKLEKVFSKIPMFNKIVDMVDDVEVAAPYVIFVLVHPKDYKLAVKNAGNISVTVADR LRLEKKPLIAVRNDLFTRPGTFELNIMLADEVTEHAPYNVLVRVSTHDEVFIKKNSRNIASTIAGRLGSWKFPFVSVKPD MLLEKPGDFEIELEKGGSLDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38413; Mature: 38413
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVVDASNVAYSTKNENSQPQMSNILAAVKSLEESGDEFVIIADASLRHDIDDKEKFEK CEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCHHHHHHH LLESENVEEVPAGNDADHFILNIAHNEKAKILSNDKFRDYAAEFKNINSMRIPFVIENGR HHHCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHHCCCCCEEEEEEEECCE VTFGKPKSPKKDKNILQHISDEIIKELNFKRWEVYTGKEGLEISPLNIAKQAIIRIDNDN EEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCHHHCCEEEEEECCCC DTSSKLEKVFSKIPMFNKIVDMVDDVEVAAPYVIFVLVHPKDYKLAVKNAGNISVTVADR CHHHHHHHHHHHCCHHHHHHHHHHCHHHCCCEEEEEEECCCCEEEEEECCCCEEEEEHHH LRLEKKPLIAVRNDLFTRPGTFELNIMLADEVTEHAPYNVLVRVSTHDEVFIKKNSRNIA HCCCCCCEEEEHHHHCCCCCCEEEEEEEECCHHCCCCCEEEEEEECCCEEEEEECCCHHH STIAGRLGSWKFPFVSVKPDMLLEKPGDFEIELEKGGSLDG HHHHHHCCCCCCCEEEECCCHHEECCCCEEEEEECCCCCCC >Mature Secondary Structure MKVVVDASNVAYSTKNENSQPQMSNILAAVKSLEESGDEFVIIADASLRHDIDDKEKFEK CEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCHHHHHHH LLESENVEEVPAGNDADHFILNIAHNEKAKILSNDKFRDYAAEFKNINSMRIPFVIENGR HHHCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHHCCCCCEEEEEEEECCE VTFGKPKSPKKDKNILQHISDEIIKELNFKRWEVYTGKEGLEISPLNIAKQAIIRIDNDN EEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCHHHCCEEEEEECCCC DTSSKLEKVFSKIPMFNKIVDMVDDVEVAAPYVIFVLVHPKDYKLAVKNAGNISVTVADR CHHHHHHHHHHHCCHHHHHHHHHHCHHHCCCEEEEEEECCCCEEEEEECCCCEEEEEHHH LRLEKKPLIAVRNDLFTRPGTFELNIMLADEVTEHAPYNVLVRVSTHDEVFIKKNSRNIA HCCCCCCEEEEHHHHCCCCCCEEEEEEEECCHHCCCCCEEEEEEECCCEEEEEECCCHHH STIAGRLGSWKFPFVSVKPDMLLEKPGDFEIELEKGGSLDG HHHHHHCCCCCCCEEEECCCHHEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA