| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
Click here to switch to the map view.
The map label for this gene is 148642413
Identifier: 148642413
GI number: 148642413
Start: 336587
End: 337288
Strand: Reverse
Name: 148642413
Synonym: Msm_0353
Alternate gene names: NA
Gene position: 337288-336587 (Counterclockwise)
Preceding gene: 148642414
Following gene: 148642412
Centisome position: 18.2
GC content: 30.91
Gene sequence:
>702_bases ATGCCTTACGGAACAATTCAGGATGTAAGCACATCTCAAAGTATTGTAGCAAAAATATTGAATGTCGGAACAGTTTCGGT TTATAGTGCTTATGACAACAATCAGATGAAATTAGCCAATATTTCAAATGTTAAGGAAGTTGAAAATATAATATTTTCAA GAATATCCAATCAGAATAATCTAAGAAGCAGACATTATAGAGATGATTTTTCTATAAACAGACAGCAGCCTGAATATTAT TCTGATGATGAATACTATGAACCATCTAATGACTACCGCTCAAAAAGAAGACAGTATGAGGATGGCGGTTATTATGGTGA AGATGAATATTATGAGCCTCAGGATTATTACAGAAAAGAACCTGTTAGGGATTATGAATATTATCCTGAAGAATTGAACT TTGAAGAGGAAAAAAGGCATAATTATGAATATGAACCTTACATGAAAGATTCTTTGGAAGACAATATTGAAGGTGCTGTT AACAATAGGGGTAATGGACTTCATGATAATGACTATTATAATGAAAGTACTGATGATTATTCTTATAGTGATGATGATTA CTATGGGGAAAATGAAGCTGAACTTTATTATAATGATCAGGACATTCAGGATTCAAAATTTGAAGAAAATGATATAGGTA CCCAAACAAAAGACTCTAAAGAAACTATCATCAGAAGACATTTCGACAAATTTAAAAAATAA
Upstream 100 bases:
>100_bases ATAATCTGGCAACTTATTAACTGGTATTATATGGAGTATATTTTAACTGACTCAAGAATTATTATTAAATCAGGAGTTTT ATACACTAAAAAAAAACTAC
Downstream 100 bases:
>100_bases TTTTTTTTTAAAAAATCAGGTGAAGTTAATGGAATTACTATGTATACAATCTCAGGAACATGACAAATTACCTCTTGCAG AACTAAAAGCAGTTATTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MPYGTIQDVSTSQSIVAKILNVGTVSVYSAYDNNQMKLANISNVKEVENIIFSRISNQNNLRSRHYRDDFSINRQQPEYY SDDEYYEPSNDYRSKRRQYEDGGYYGEDEYYEPQDYYRKEPVRDYEYYPEELNFEEEKRHNYEYEPYMKDSLEDNIEGAV NNRGNGLHDNDYYNESTDDYSYSDDDYYGENEAELYYNDQDIQDSKFEENDIGTQTKDSKETIIRRHFDKFKK
Sequences:
>Translated_233_residues MPYGTIQDVSTSQSIVAKILNVGTVSVYSAYDNNQMKLANISNVKEVENIIFSRISNQNNLRSRHYRDDFSINRQQPEYY SDDEYYEPSNDYRSKRRQYEDGGYYGEDEYYEPQDYYRKEPVRDYEYYPEELNFEEEKRHNYEYEPYMKDSLEDNIEGAV NNRGNGLHDNDYYNESTDDYSYSDDDYYGENEAELYYNDQDIQDSKFEENDIGTQTKDSKETIIRRHFDKFKK >Mature_232_residues PYGTIQDVSTSQSIVAKILNVGTVSVYSAYDNNQMKLANISNVKEVENIIFSRISNQNNLRSRHYRDDFSINRQQPEYYS DDEYYEPSNDYRSKRRQYEDGGYYGEDEYYEPQDYYRKEPVRDYEYYPEELNFEEEKRHNYEYEPYMKDSLEDNIEGAVN NRGNGLHDNDYYNESTDDYSYSDDDYYGENEAELYYNDQDIQDSKFEENDIGTQTKDSKETIIRRHFDKFKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28113; Mature: 27982
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYGTIQDVSTSQSIVAKILNVGTVSVYSAYDNNQMKLANISNVKEVENIIFSRISNQNN CCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCC LRSRHYRDDFSINRQQPEYYSDDEYYEPSNDYRSKRRQYEDGGYYGEDEYYEPQDYYRKE HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCC PVRDYEYYPEELNFEEEKRHNYEYEPYMKDSLEDNIEGAVNNRGNGLHDNDYYNESTDDY CCCHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SYSDDDYYGENEAELYYNDQDIQDSKFEENDIGTQTKDSKETIIRRHFDKFKK CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure PYGTIQDVSTSQSIVAKILNVGTVSVYSAYDNNQMKLANISNVKEVENIIFSRISNQNN CCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCC LRSRHYRDDFSINRQQPEYYSDDEYYEPSNDYRSKRRQYEDGGYYGEDEYYEPQDYYRKE HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCC PVRDYEYYPEELNFEEEKRHNYEYEPYMKDSLEDNIEGAVNNRGNGLHDNDYYNESTDDY CCCHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SYSDDDYYGENEAELYYNDQDIQDSKFEENDIGTQTKDSKETIIRRHFDKFKK CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA