| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642383
Identifier: 148642383
GI number: 148642383
Start: 307521
End: 307790
Strand: Reverse
Name: 148642383
Synonym: Msm_0323
Alternate gene names: NA
Gene position: 307790-307521 (Counterclockwise)
Preceding gene: 148642384
Following gene: 148642382
Centisome position: 16.61
GC content: 27.41
Gene sequence:
>270_bases ATGGAATTTGTTGTATCAATTATTGCAATAGCTTTAATGTTAATCGGAGCATTTGGAGTAATATTATTGAAAAAACCATT AGACAAAGTAATTATGTTTTCCATAATGGATGCAGGTTTTTTACTTGTTGTGGTGCTATTTAGATATTTGGATGTTGCAA TGTTTGTTGCATTGTCTGATCCTTTATGTACTTTAATTTTTATTATGGCTATTGTTAAAATTAAAGAAATTAGACAAAGA AAAGTTAAAAGTGGTGAGTTACATGATTGA
Upstream 100 bases:
>100_bases TGCTGCTGCATTTTTCATATGTTCTACAATTAGTGCTAATGCTATTGCAACAAGTTTGGATAAGCTTGATGATGAAATAA TTCTTGATTGAGGCGTTGAA
Downstream 100 bases:
>100_bases TGTTAATCTGTTCTTTTATGTTGGTATTTTTCTAGCTATTGTAGGTAGTTTAGCTACTGCATGGGGTCCAGGTGTAAAAG ACCCTATTATAAGAACATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MEFVVSIIAIALMLIGAFGVILLKKPLDKVIMFSIMDAGFLLVVVLFRYLDVAMFVALSDPLCTLIFIMAIVKIKEIRQR KVKSGELHD
Sequences:
>Translated_89_residues MEFVVSIIAIALMLIGAFGVILLKKPLDKVIMFSIMDAGFLLVVVLFRYLDVAMFVALSDPLCTLIFIMAIVKIKEIRQR KVKSGELHD >Mature_89_residues MEFVVSIIAIALMLIGAFGVILLKKPLDKVIMFSIMDAGFLLVVVLFRYLDVAMFVALSDPLCTLIFIMAIVKIKEIRQR KVKSGELHD
Specific function: Unknown
COG id: COG4039
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9985; Mature: 9985
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFVVSIIAIALMLIGAFGVILLKKPLDKVIMFSIMDAGFLLVVVLFRYLDVAMFVALSD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLCTLIFIMAIVKIKEIRQRKVKSGELHD HHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEFVVSIIAIALMLIGAFGVILLKKPLDKVIMFSIMDAGFLLVVVLFRYLDVAMFVALSD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PLCTLIFIMAIVKIKEIRQRKVKSGELHD HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA