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The map label for this gene is 148642377

Identifier: 148642377

GI number: 148642377

Start: 304214

End: 305074

Strand: Reverse

Name: 148642377

Synonym: Msm_0317

Alternate gene names: NA

Gene position: 305074-304214 (Counterclockwise)

Preceding gene: 148642378

Following gene: 148642376

Centisome position: 16.46

GC content: 33.33

Gene sequence:

>861_bases
ATGAATTTGATGGCAGATATTTTAATTAATGTAATAATCGCATTCCTTGCAGGCAGTTTGCTTTTAGGTTTGCACAGAAA
AGTCATTGCTCGTGTTCAGCTTAGACCGGGCCCTCCAATTATTCAGCATTTATTACATTCTTTAAAGTTCTTTTTTAAAG
AATCTTCATTTCCAAAAACTGTTTCAATGCCATTTTATGTTGGTATTGTTGTTATTTTGGCTATAATTTGGGTTGTTGGT
GTTATTGTAGGTCCTGTAGCTCATGATTCATTACTTATCCTGTTTGGTGTTTATGCAGTTTACAAAATTGTGGAACATAA
TTCCGGATCAAGTTCTGGTTCTCCTTATGGTAAACTGAGCTGTGTAAGGGCAGTTTTATCTGCAGCTACTGAACTTCCAT
TATTTGCAGCTATTGTTCTTGTTTATTTAAAAACAGATTCCATGAATATTGGAAAAATTATAGCATATCAGGGAGTTCAT
GGTCCTTTGGCATTTTCCATTCCTTTAGCTGCTCTGATGTTCTTTATGCTGATTATATCCAAGTCTCCGTATTCTCCATT
TGGAATTACAAAAGGTAAAGATTTAATTTCCGGATTTGAAACAGAACACTTTGGATTCTTAAGAGGATTTATAATGTTTT
CAGAGTCTGTTTCATGGTATGTGATGCTTTGGGTATTTTTAACAATATTCTTTGGACCTTTATCTCCGGTTTATTATGCT
TTGGGAATGATAATTATAACATTTATTACTGGATTTATTAATGCTGTAACTCCAATGTTAAATCCGAACCATTCTGTTAT
GACTCAGATAACAATTGGTGCGGTTTGTTTTGTTGGAACACTTTTAATGATATTTGTATGA

Upstream 100 bases:

>100_bases
TTATGGATTTTAGGTTTAGGTTTATTAACAATGGCCAAACCGAGAAAAGATGATAAGGAAGAAAGGATAAAAGAACCATT
TACAGGATATTAGTGGTATT

Downstream 100 bases:

>100_bases
GGTTGAGATGATGAATGATAAAGCTACAATATATTTAACTTCTTTAGTTGGATTTGGTGCAGTGGTTCTTACTTTAATAA
CTACTTTCCTTCATACAACT

Product: NADH dehydrogenase (ubiquinone), subunit 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MNLMADILINVIIAFLAGSLLLGLHRKVIARVQLRPGPPIIQHLLHSLKFFFKESSFPKTVSMPFYVGIVVILAIIWVVG
VIVGPVAHDSLLILFGVYAVYKIVEHNSGSSSGSPYGKLSCVRAVLSAATELPLFAAIVLVYLKTDSMNIGKIIAYQGVH
GPLAFSIPLAALMFFMLIISKSPYSPFGITKGKDLISGFETEHFGFLRGFIMFSESVSWYVMLWVFLTIFFGPLSPVYYA
LGMIIITFITGFINAVTPMLNPNHSVMTQITIGAVCFVGTLLMIFV

Sequences:

>Translated_286_residues
MNLMADILINVIIAFLAGSLLLGLHRKVIARVQLRPGPPIIQHLLHSLKFFFKESSFPKTVSMPFYVGIVVILAIIWVVG
VIVGPVAHDSLLILFGVYAVYKIVEHNSGSSSGSPYGKLSCVRAVLSAATELPLFAAIVLVYLKTDSMNIGKIIAYQGVH
GPLAFSIPLAALMFFMLIISKSPYSPFGITKGKDLISGFETEHFGFLRGFIMFSESVSWYVMLWVFLTIFFGPLSPVYYA
LGMIIITFITGFINAVTPMLNPNHSVMTQITIGAVCFVGTLLMIFV
>Mature_286_residues
MNLMADILINVIIAFLAGSLLLGLHRKVIARVQLRPGPPIIQHLLHSLKFFFKESSFPKTVSMPFYVGIVVILAIIWVVG
VIVGPVAHDSLLILFGVYAVYKIVEHNSGSSSGSPYGKLSCVRAVLSAATELPLFAAIVLVYLKTDSMNIGKIIAYQGVH
GPLAFSIPLAALMFFMLIISKSPYSPFGITKGKDLISGFETEHFGFLRGFIMFSESVSWYVMLWVFLTIFFGPLSPVYYA
LGMIIITFITGFINAVTPMLNPNHSVMTQITIGAVCFVGTLLMIFV

Specific function: Unknown

COG id: COG0650

COG function: function code C; Formate hydrogenlyase subunit 4

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001694 [H]

Pfam domain/function: PF00146 NADHdh [H]

EC number: =1.6.5.3 [H]

Molecular weight: Translated: 31332; Mature: 31332

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]