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The map label for this gene is rnp3 [H]

Identifier: 148642307

GI number: 148642307

Start: 232317

End: 233021

Strand: Reverse

Name: rnp3 [H]

Synonym: Msm_0247

Alternate gene names: 148642307

Gene position: 233021-232317 (Counterclockwise)

Preceding gene: 148642308

Following gene: 148642306

Centisome position: 12.57

GC content: 28.65

Gene sequence:

>705_bases
ATGTTTTTTGATTTAAATGTTAAAGGAAACAGCTATGATAATAATTTGAAATTAGCTGAGGAAGCTTCAAAGTATGGTTG
GGATCATATTAATTTTTCTTATAATCAAAATAAATTTGCCAAAGCTTTAGAGTTTAAAAAGGATTTGCAGGATAATTTGG
ACATTGGCATAGATTATACTTTAGAAATAGATTCCGGCAATGTTAATGAAATTAGAAAAATAGCCAGAAAGTTCAGAAAT
AAATCATCATGCATTAGTGTAATTGGTGGAGATTTAAAAGTAAATCGGGCTGTTTTGGAAAATATCCAGTTGGATGTTTT
ATCAAGACCTTATTTAAAACGATATGACAGTGGTCTTAATCAGGTTTTGGCTAAAGAATCTTTGAATAATAATGTAGCTG
TTGAAATTTGCTTTATAGATATTTTGAAATCTTATTTAACATATAGGGCTAAAACAATAGCTAATATTAAGGATGTAATT
TCATTACATAAGAAATTTGACTTCCCGTTAATTTTGTCTTCAAGAGCAGAGTCCGTTTTTGATATTAAGACAACTAAAGA
TTTCAGCTCAGTATTTCTTTCAGTTGGATTAACTCAAAGTGAAATTGACAAATCATTTACCTCAGCTGAAAACATTTTGG
AATTTAATAAAAACAGGAAAAACATGGTTTTAAAAGGAGTTAGGGAGGTTAATGATGAAGCTTAA

Upstream 100 bases:

>100_bases
CTACAAAAATTTATTTTCTTTTTTTTAATGCTTTTTCCATAACTATTAATAATAAATAAAATTTAATATTTAATATAAAT
GATTCAATAGGATTTTTAAA

Downstream 100 bases:

>100_bases
GGTTCTTCCCCCTACACTTAGGAAAAATAACAGGTATTTGGCATTGGATATTAAAGTTAAAAGTGTTATTTCTAAAGATG
ATTTGGTTAATATTGTTTGG

Product: ribonuclease P protein component 3

Products: NA

Alternate protein names: RNase P component 3 [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MFFDLNVKGNSYDNNLKLAEEASKYGWDHINFSYNQNKFAKALEFKKDLQDNLDIGIDYTLEIDSGNVNEIRKIARKFRN
KSSCISVIGGDLKVNRAVLENIQLDVLSRPYLKRYDSGLNQVLAKESLNNNVAVEICFIDILKSYLTYRAKTIANIKDVI
SLHKKFDFPLILSSRAESVFDIKTTKDFSSVFLSVGLTQSEIDKSFTSAENILEFNKNRKNMVLKGVREVNDEA

Sequences:

>Translated_234_residues
MFFDLNVKGNSYDNNLKLAEEASKYGWDHINFSYNQNKFAKALEFKKDLQDNLDIGIDYTLEIDSGNVNEIRKIARKFRN
KSSCISVIGGDLKVNRAVLENIQLDVLSRPYLKRYDSGLNQVLAKESLNNNVAVEICFIDILKSYLTYRAKTIANIKDVI
SLHKKFDFPLILSSRAESVFDIKTTKDFSSVFLSVGLTQSEIDKSFTSAENILEFNKNRKNMVLKGVREVNDEA
>Mature_234_residues
MFFDLNVKGNSYDNNLKLAEEASKYGWDHINFSYNQNKFAKALEFKKDLQDNLDIGIDYTLEIDSGNVNEIRKIARKFRN
KSSCISVIGGDLKVNRAVLENIQLDVLSRPYLKRYDSGLNQVLAKESLNNNVAVEICFIDILKSYLTYRAKTIANIKDVI
SLHKKFDFPLILSSRAESVFDIKTTKDFSSVFLSVGLTQSEIDKSFTSAENILEFNKNRKNMVLKGVREVNDEA

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends [H]

COG id: COG1603

COG function: function code J; RNase P/RNase MRP subunit p30

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016195
- InterPro:   IPR002738 [H]

Pfam domain/function: PF01876 RNase_P_p30 [H]

EC number: =3.1.26.5 [H]

Molecular weight: Translated: 26716; Mature: 26716

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFDLNVKGNSYDNNLKLAEEASKYGWDHINFSYNQNKFAKALEFKKDLQDNLDIGIDYT
CEEEEECCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEE
LEIDSGNVNEIRKIARKFRNKSSCISVIGGDLKVNRAVLENIQLDVLSRPYLKRYDSGLN
EEECCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHH
QVLAKESLNNNVAVEICFIDILKSYLTYRAKTIANIKDVISLHKKFDFPLILSSRAESVF
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEE
DIKTTKDFSSVFLSVGLTQSEIDKSFTSAENILEFNKNRKNMVLKGVREVNDEA
EEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFFDLNVKGNSYDNNLKLAEEASKYGWDHINFSYNQNKFAKALEFKKDLQDNLDIGIDYT
CEEEEECCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEEEE
LEIDSGNVNEIRKIARKFRNKSSCISVIGGDLKVNRAVLENIQLDVLSRPYLKRYDSGLN
EEECCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHH
QVLAKESLNNNVAVEICFIDILKSYLTYRAKTIANIKDVISLHKKFDFPLILSSRAESVF
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEE
DIKTTKDFSSVFLSVGLTQSEIDKSFTSAENILEFNKNRKNMVLKGVREVNDEA
EEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463; 12003490 [H]