| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is rpl37e [H]
Identifier: 148642241
GI number: 148642241
Start: 181738
End: 181905
Strand: Reverse
Name: rpl37e [H]
Synonym: Msm_0181
Alternate gene names: 148642241
Gene position: 181905-181738 (Counterclockwise)
Preceding gene: 148642242
Following gene: 148642240
Centisome position: 9.82
GC content: 32.74
Gene sequence:
>168_bases ATGGGTAAAAAGAATAAAAAGACCCATATAAGATGCAGAAGATGTGGAAGAAACACTTACCACATTCATAAAAAAGTTTG TGCTTCCTGTGGATTCGGTAAATCTAAAAGGATTAGAAGATACAGCTGGCAAAACAAAAAACCAACCACTAGAAAAAGAT TAGTTTAA
Upstream 100 bases:
>100_bases ATTGTCTATATCTCACCATAAGTACTATTTTAATTCTAATATTTGTAATAAACGAACTGATTAATTAGGAGGTGTATCAG TGTCAAAAGGTACTCCATCA
Downstream 100 bases:
>100_bases GTTGGTAAAAGCGGAAGATTATTTATTTAATCTTCATCAATTCTATTTTTTCTATTTTTATAAAAACTTATTCAGCTGTT TTATTGGATTTTTCCTGTTT
Product: 50S ribosomal protein L37e
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MGKKNKKTHIRCRRCGRNTYHIHKKVCASCGFGKSKRIRRYSWQNKKPTTRKRLV
Sequences:
>Translated_55_residues MGKKNKKTHIRCRRCGRNTYHIHKKVCASCGFGKSKRIRRYSWQNKKPTTRKRLV >Mature_54_residues GKKNKKTHIRCRRCGRNTYHIHKKVCASCGFGKSKRIRRYSWQNKKPTTRKRLV
Specific function: Binds to the 23S rRNA [H]
COG id: COG2126
COG function: function code J; Ribosomal protein L37E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L37e family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011331 - InterPro: IPR001569 - InterPro: IPR018267 - InterPro: IPR011332 - ProDom: PD005132 [H]
Pfam domain/function: PF01907 Ribosomal_L37e [H]
EC number: NA
Molecular weight: Translated: 6632; Mature: 6501
Theoretical pI: Translated: 12.10; Mature: 12.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKNKKTHIRCRRCGRNTYHIHKKVCASCGFGKSKRIRRYSWQNKKPTTRKRLV CCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC >Mature Secondary Structure GKKNKKTHIRCRRCGRNTYHIHKKVCASCGFGKSKRIRRYSWQNKKPTTRKRLV CCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA