Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642240

Identifier: 148642240

GI number: 148642240

Start: 181081

End: 181506

Strand: Reverse

Name: 148642240

Synonym: Msm_0180

Alternate gene names: NA

Gene position: 181506-181081 (Counterclockwise)

Preceding gene: 148642241

Following gene: 148642239

Centisome position: 9.79

GC content: 31.92

Gene sequence:

>426_bases
ATGGAGGTTTCAGTTATGACTCAATTAAAGGAGATTGTTGAAAAAGAAAACATAAACTTGGATGAATATGTAACCTTTGT
AACAGATAATCAGAAAGTATTGGCAGCTAATGTTAAATATGTAAAGATTAAACAAAGGCAAGATCATTTGATGGGTATAA
CATTTACTATAAATCCTAAACAGCTAAAAGAGGTTAACGAGTTTTTTGATTCCTTAACTTCCGGTGAAAGAATCTATTAC
AATATCAGTCAGACAGGATATATTCCTGTAAACTACAGGGGAATGCTGCCGATTTCTAAAAATGTAACACATAATCCTGA
AGAAACATTTTCAATAACTGTTATGGTAGATCCTGCTGTCACTATCCCTAAAGATACTTATGAAGAACCTGTCTGCGATA
GCTGTGTGTTTCATTATATAAAATAA

Upstream 100 bases:

>100_bases
TGATATTTGCCAATATTTTGGCATACCTAATAAATCGTTACATTTATAAATAAGTTATTTAATAAAGTCATCCAATGAGC
ATGTTATTTCATTAAATTTC

Downstream 100 bases:

>100_bases
ACAGGTGTAAAAGATGGATGATACTGATATAAGTCCTTATATAACATTGACTAAAGTTCGTTCTGGTGAAAGACTGCAAA
TTGAACAGAAATATGTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MEVSVMTQLKEIVEKENINLDEYVTFVTDNQKVLAANVKYVKIKQRQDHLMGITFTINPKQLKEVNEFFDSLTSGERIYY
NISQTGYIPVNYRGMLPISKNVTHNPEETFSITVMVDPAVTIPKDTYEEPVCDSCVFHYIK

Sequences:

>Translated_141_residues
MEVSVMTQLKEIVEKENINLDEYVTFVTDNQKVLAANVKYVKIKQRQDHLMGITFTINPKQLKEVNEFFDSLTSGERIYY
NISQTGYIPVNYRGMLPISKNVTHNPEETFSITVMVDPAVTIPKDTYEEPVCDSCVFHYIK
>Mature_141_residues
MEVSVMTQLKEIVEKENINLDEYVTFVTDNQKVLAANVKYVKIKQRQDHLMGITFTINPKQLKEVNEFFDSLTSGERIYY
NISQTGYIPVNYRGMLPISKNVTHNPEETFSITVMVDPAVTIPKDTYEEPVCDSCVFHYIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16304; Mature: 16304

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVSVMTQLKEIVEKENINLDEYVTFVTDNQKVLAANVKYVKIKQRQDHLMGITFTINPK
CCCHHHHHHHHHHHHCCCCHHHEEEEEECCCEEEEECEEEEEEECCCCCEEEEEEEECHH
QLKEVNEFFDSLTSGERIYYNISQTGYIPVNYRGMLPISKNVTHNPEETFSITVMVDPAV
HHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCEECCCCCCCCCCCCCEEEEEEEECCCE
TIPKDTYEEPVCDSCVFHYIK
ECCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MEVSVMTQLKEIVEKENINLDEYVTFVTDNQKVLAANVKYVKIKQRQDHLMGITFTINPK
CCCHHHHHHHHHHHHCCCCHHHEEEEEECCCEEEEECEEEEEEECCCCCEEEEEEEECHH
QLKEVNEFFDSLTSGERIYYNISQTGYIPVNYRGMLPISKNVTHNPEETFSITVMVDPAV
HHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCEECCCCCCCCCCCCCEEEEEEEECCCE
TIPKDTYEEPVCDSCVFHYIK
ECCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA