Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

Click here to switch to the map view.

The map label for this gene is 148642231

Identifier: 148642231

GI number: 148642231

Start: 163775

End: 166087

Strand: Reverse

Name: 148642231

Synonym: Msm_0171

Alternate gene names: NA

Gene position: 166087-163775 (Counterclockwise)

Preceding gene: 148642233

Following gene: 148642229

Centisome position: 8.96

GC content: 34.85

Gene sequence:

>2313_bases
ATGTTCAATAAAAAGTATTTTATTTTAGTTTTTTTTGTTTTTCTGATAGCTATAACTTCAGTCAGTGCGCAGGATGATGC
TGTAGCTAGTCAGGATTTAAATGAATTGTCATTTAATGATAATGTGGTGTTGGATACTAACACTGATGCAGAACACTATG
CAGATGGTGGAGTAAGGCAGGACACAGGTCAGACTGCTGATGATTTGATTAATTTAAGTGAATGCAGTTCAGCTGTTCTT
CAGGTAAGTGATAATGAAGGAGTTATTTGTATCAGGCGTGATGCTGCAAATGCCGCTGATATTTATATTGAAAGCGGTAG
CTGGGGAGATATTGGTTATCTGAAGCAATATAAAACCAGCGGGGGTTATTTTTCACATGCAATTGTCACATCCAATGGCT
GGCTTATTGGTAATGGTGGTGTAACAGACGGTTCTGTATTTCGCCAGATTGAAAGCATAGCTTCTGAAATGGTTGTCACC
AATCAGATTACAAATGATTATCTTTCAAGAATTTATAAGATAATGTCCAGATATTCTTTAGGTCATTTTGTAATTAAGGC
AGCTGACGGAACCTATGGTGTTGTTTTCAGTAATTTGTATCATGTTTCTAAACTGCAGCCTGGACAGTATGTTTTATGTC
CTAATATTTATTCCATGTCTCAAAAAGGCAGTTATGACAGCAGTCTGAATCCGGTTGATGCAGCCATTAAAAAAGTTTAT
ACTGACAGCTATGGTGTCAATAGGAGAAATATAATGACTTATCACTGGAAGCTGACTGCTTCTTCTAATGGACTGTCCTA
TGGAGTAGATTCCTATGCATCAAATGATGACGGTAGAGGTGTTGGCCGCTCAACATCCAATATGGCAGATAATGTTTATT
ACTTCAGTAATTTCCATTCAAGAAATTCCCTTCCATTAGCTAGAGATAAACTATTTTTGGGAACTCATGTTTTTGAAAAC
AGTATTGAAGTTTTCAGATTACTGACTCCCGTCAGCTCATGTCCTGTTGGAGATAATATTGAGTTGAAATATCAGGTTAA
CTATATTGCTCATTCAAGCCCTGTAGTTCAGTTTGCTCTTCCTGAAGGATTTGATTTTAATAATGCAAGTGTATCTAGGG
GAAATTACAGATTGGATTCTGGCCGTATTGTAGTTTGGAATTTAAATGACTGTGATATGAATAATTACATCACAATTTCT
CTTAAGGCACTTAAATCAGGACAGTTTGATTTATACCATTCACTGGACAACAATTTTGTCGGAAGCGATAAATTATTTGC
AAATGATTATGGTGCTGTACTTTGTGCAGATGACGTAAACAAATATTATAGAGGTCCTGAAAGGTTTAGCATATGCTTAA
AGGATGTTAATGGCAATCCTATTGTTGGTGAAAATGTTATTATTAATATCAATGGTGTTGATTATAAAAAAGTTAGTGAT
GATAAGGGCACTGCTTCACTGGCCATTAATCTGGATTCTGGTGAATATCTTGCCAAAGTAAGTTATAATGGACGTTTCGG
CAGTGATTCCAAAAAAGCCAATGTAAAAGTATATGAAACTATCTCAGGAAATGATATTGTAAAGATGTTCAGAAATGAAA
CCCAGTTTTATGCAAAATTCATTGATAGTTCAGGAAACCCTTTAGCTAAAAGGGCAGTTACATTCAATATCAATGGTGTG
TTTTACACAAGAAACACTGATGATTCAGGTTATGCAAAATTAAACATTAACTTAAGACCCGGAACCTACATTTTAACGGC
ATACAACCCTGTAAACAATGAGAAAAAAGGTTTCAACATAACTGTCAAAGCTCTTATCTGTGAAAACCATGATATAGTTA
AATATTATAAAAACAGCACACAATACACAGCAAAAGTCTATGATAAAGACGGAAGCTTAGCTATTGGTAAAAATGTAACA
TTTAACATAAACGGGGTATTCTATAAAAGGACAGTTGATGAAAATGGTACAGTAACACTAAACATCAATTTGAATCCCGG
AAAATATATTGTAACTGCAATATATGAAGGATATGATGTGGGAAACAATGTGGTTGTTAAAAGTGTTCTGCTTACTGATG
ATTTGTCCATGAAGTTTAAGGACGGCAGTAAGTTTAATGCAACTGTTCTTGACGGTCAGGGAAAACCCTTAGCTAATCAG
ACAGTGATATTCAATGTAAACGGAGTATTTTACAATAAAACAACAGCAGATAATGGTGTTGCAAGTTTAAATATCCGACT
TCTCAGGGGAGAATATATCATCACTTCAATATGGAACAGTTATCAAATTGGAAATAAAATTACAATCAGTTAG

Upstream 100 bases:

>100_bases
TGATTTATATTCTAAAAACACATCTGAATTTCATAAAAATGTTTATATTTTAACATACAATCATTAAATATCTGTTAATT
AATAGGTTACAGGTGAATTC

Downstream 100 bases:

>100_bases
GAGAAATCTTCTCTTAACTCTTTTTTTTATTTTTATTAATTTATTCCAATAATTTAATCATTCCAAAGCCCATTGAATTT
TTCTCACCTATTCCGACATC

Product: hypothetical protein

Products: NA

Alternate protein names: Adhesin-Like Protein With Transglutaminase Domain; Peptidase M; Cysteine Protease; Transglutaminase-Like Protein Cysteine Protease

Number of amino acids: Translated: 770; Mature: 770

Protein sequence:

>770_residues
MFNKKYFILVFFVFLIAITSVSAQDDAVASQDLNELSFNDNVVLDTNTDAEHYADGGVRQDTGQTADDLINLSECSSAVL
QVSDNEGVICIRRDAANAADIYIESGSWGDIGYLKQYKTSGGYFSHAIVTSNGWLIGNGGVTDGSVFRQIESIASEMVVT
NQITNDYLSRIYKIMSRYSLGHFVIKAADGTYGVVFSNLYHVSKLQPGQYVLCPNIYSMSQKGSYDSSLNPVDAAIKKVY
TDSYGVNRRNIMTYHWKLTASSNGLSYGVDSYASNDDGRGVGRSTSNMADNVYYFSNFHSRNSLPLARDKLFLGTHVFEN
SIEVFRLLTPVSSCPVGDNIELKYQVNYIAHSSPVVQFALPEGFDFNNASVSRGNYRLDSGRIVVWNLNDCDMNNYITIS
LKALKSGQFDLYHSLDNNFVGSDKLFANDYGAVLCADDVNKYYRGPERFSICLKDVNGNPIVGENVIININGVDYKKVSD
DKGTASLAINLDSGEYLAKVSYNGRFGSDSKKANVKVYETISGNDIVKMFRNETQFYAKFIDSSGNPLAKRAVTFNINGV
FYTRNTDDSGYAKLNINLRPGTYILTAYNPVNNEKKGFNITVKALICENHDIVKYYKNSTQYTAKVYDKDGSLAIGKNVT
FNINGVFYKRTVDENGTVTLNINLNPGKYIVTAIYEGYDVGNNVVVKSVLLTDDLSMKFKDGSKFNATVLDGQGKPLANQ
TVIFNVNGVFYNKTTADNGVASLNIRLLRGEYIITSIWNSYQIGNKITIS

Sequences:

>Translated_770_residues
MFNKKYFILVFFVFLIAITSVSAQDDAVASQDLNELSFNDNVVLDTNTDAEHYADGGVRQDTGQTADDLINLSECSSAVL
QVSDNEGVICIRRDAANAADIYIESGSWGDIGYLKQYKTSGGYFSHAIVTSNGWLIGNGGVTDGSVFRQIESIASEMVVT
NQITNDYLSRIYKIMSRYSLGHFVIKAADGTYGVVFSNLYHVSKLQPGQYVLCPNIYSMSQKGSYDSSLNPVDAAIKKVY
TDSYGVNRRNIMTYHWKLTASSNGLSYGVDSYASNDDGRGVGRSTSNMADNVYYFSNFHSRNSLPLARDKLFLGTHVFEN
SIEVFRLLTPVSSCPVGDNIELKYQVNYIAHSSPVVQFALPEGFDFNNASVSRGNYRLDSGRIVVWNLNDCDMNNYITIS
LKALKSGQFDLYHSLDNNFVGSDKLFANDYGAVLCADDVNKYYRGPERFSICLKDVNGNPIVGENVIININGVDYKKVSD
DKGTASLAINLDSGEYLAKVSYNGRFGSDSKKANVKVYETISGNDIVKMFRNETQFYAKFIDSSGNPLAKRAVTFNINGV
FYTRNTDDSGYAKLNINLRPGTYILTAYNPVNNEKKGFNITVKALICENHDIVKYYKNSTQYTAKVYDKDGSLAIGKNVT
FNINGVFYKRTVDENGTVTLNINLNPGKYIVTAIYEGYDVGNNVVVKSVLLTDDLSMKFKDGSKFNATVLDGQGKPLANQ
TVIFNVNGVFYNKTTADNGVASLNIRLLRGEYIITSIWNSYQIGNKITIS
>Mature_770_residues
MFNKKYFILVFFVFLIAITSVSAQDDAVASQDLNELSFNDNVVLDTNTDAEHYADGGVRQDTGQTADDLINLSECSSAVL
QVSDNEGVICIRRDAANAADIYIESGSWGDIGYLKQYKTSGGYFSHAIVTSNGWLIGNGGVTDGSVFRQIESIASEMVVT
NQITNDYLSRIYKIMSRYSLGHFVIKAADGTYGVVFSNLYHVSKLQPGQYVLCPNIYSMSQKGSYDSSLNPVDAAIKKVY
TDSYGVNRRNIMTYHWKLTASSNGLSYGVDSYASNDDGRGVGRSTSNMADNVYYFSNFHSRNSLPLARDKLFLGTHVFEN
SIEVFRLLTPVSSCPVGDNIELKYQVNYIAHSSPVVQFALPEGFDFNNASVSRGNYRLDSGRIVVWNLNDCDMNNYITIS
LKALKSGQFDLYHSLDNNFVGSDKLFANDYGAVLCADDVNKYYRGPERFSICLKDVNGNPIVGENVIININGVDYKKVSD
DKGTASLAINLDSGEYLAKVSYNGRFGSDSKKANVKVYETISGNDIVKMFRNETQFYAKFIDSSGNPLAKRAVTFNINGV
FYTRNTDDSGYAKLNINLRPGTYILTAYNPVNNEKKGFNITVKALICENHDIVKYYKNSTQYTAKVYDKDGSLAIGKNVT
FNINGVFYKRTVDENGTVTLNINLNPGKYIVTAIYEGYDVGNNVVVKSVLLTDDLSMKFKDGSKFNATVLDGQGKPLANQ
TVIFNVNGVFYNKTTADNGVASLNIRLLRGEYIITSIWNSYQIGNKITIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85229; Mature: 85229

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNKKYFILVFFVFLIAITSVSAQDDAVASQDLNELSFNDNVVLDTNTDAEHYADGGVRQ
CCCCEEHHHHHHHHHHHHHCCCCCCCCHHHCCCHHCCCCCCEEEECCCCHHHHCCCCCCC
DTGQTADDLINLSECSSAVLQVSDNEGVICIRRDAANAADIYIESGSWGDIGYLKQYKTS
CCCCCHHHHEEHHHCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCHHHEECCC
GGYFSHAIVTSNGWLIGNGGVTDGSVFRQIESIASEMVVTNQITNDYLSRIYKIMSRYSL
CCEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCC
GHFVIKAADGTYGVVFSNLYHVSKLQPGQYVLCPNIYSMSQKGSYDSSLNPVDAAIKKVY
CEEEEEECCCCEEEEECCEEEHHCCCCCCEEECCCHHCCCCCCCCCCCCCHHHHHHHHHH
TDSYGVNRRNIMTYHWKLTASSNGLSYGVDSYASNDDGRGVGRSTSNMADNVYYFSNFHS
CCCCCCCCCEEEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
RNSLPLARDKLFLGTHVFENSIEVFRLLTPVSSCPVGDNIELKYQVNYIAHSSPVVQFAL
CCCCCCCCCEEEEEHHHHHCCHHHHEEECCHHCCCCCCCEEEEEEEEEEECCCCEEEEEC
PEGFDFNNASVSRGNYRLDSGRIVVWNLNDCDMNNYITISLKALKSGQFDLYHSLDNNFV
CCCCCCCCCEECCCCEEECCCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEECCCCCCC
GSDKLFANDYGAVLCADDVNKYYRGPERFSICLKDVNGNPIVGENVIININGVDYKKVSD
CCCCEEECCCCEEEEECCHHHHHCCCCCEEEEEEECCCCCEECCEEEEEECCCCEEEECC
DKGTASLAINLDSGEYLAKVSYNGRFGSDSKKANVKVYETISGNDIVKMFRNETQFYAKF
CCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHCCHHEEHHH
IDSSGNPLAKRAVTFNINGVFYTRNTDDSGYAKLNINLRPGTYILTAYNPVNNEKKGFNI
HCCCCCCCEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCEEE
TVKALICENHDIVKYYKNSTQYTAKVYDKDGSLAIGKNVTFNINGVFYKRTVDENGTVTL
EEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEECCEEEEEEEEEEEEEEECCCCEEEE
NINLNPGKYIVTAIYEGYDVGNNVVVKSVLLTDDLSMKFKDGSKFNATVLDGQGKPLANQ
EEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCEEEECCCCEEEEEEECCCCCCCCCC
TVIFNVNGVFYNKTTADNGVASLNIRLLRGEYIITSIWNSYQIGNKITIS
EEEEEECEEEEECCCCCCCEEEEEEEEEECCEEEEEECCCEECCCEEEEC
>Mature Secondary Structure
MFNKKYFILVFFVFLIAITSVSAQDDAVASQDLNELSFNDNVVLDTNTDAEHYADGGVRQ
CCCCEEHHHHHHHHHHHHHCCCCCCCCHHHCCCHHCCCCCCEEEECCCCHHHHCCCCCCC
DTGQTADDLINLSECSSAVLQVSDNEGVICIRRDAANAADIYIESGSWGDIGYLKQYKTS
CCCCCHHHHEEHHHCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCHHHEECCC
GGYFSHAIVTSNGWLIGNGGVTDGSVFRQIESIASEMVVTNQITNDYLSRIYKIMSRYSL
CCEEEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHCCC
GHFVIKAADGTYGVVFSNLYHVSKLQPGQYVLCPNIYSMSQKGSYDSSLNPVDAAIKKVY
CEEEEEECCCCEEEEECCEEEHHCCCCCCEEECCCHHCCCCCCCCCCCCCHHHHHHHHHH
TDSYGVNRRNIMTYHWKLTASSNGLSYGVDSYASNDDGRGVGRSTSNMADNVYYFSNFHS
CCCCCCCCCEEEEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
RNSLPLARDKLFLGTHVFENSIEVFRLLTPVSSCPVGDNIELKYQVNYIAHSSPVVQFAL
CCCCCCCCCEEEEEHHHHHCCHHHHEEECCHHCCCCCCCEEEEEEEEEEECCCCEEEEEC
PEGFDFNNASVSRGNYRLDSGRIVVWNLNDCDMNNYITISLKALKSGQFDLYHSLDNNFV
CCCCCCCCCEECCCCEEECCCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEECCCCCCC
GSDKLFANDYGAVLCADDVNKYYRGPERFSICLKDVNGNPIVGENVIININGVDYKKVSD
CCCCEEECCCCEEEEECCHHHHHCCCCCEEEEEEECCCCCEECCEEEEEECCCCEEEECC
DKGTASLAINLDSGEYLAKVSYNGRFGSDSKKANVKVYETISGNDIVKMFRNETQFYAKF
CCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHCCHHEEHHH
IDSSGNPLAKRAVTFNINGVFYTRNTDDSGYAKLNINLRPGTYILTAYNPVNNEKKGFNI
HCCCCCCCEEEEEEEEEEEEEEECCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCEEE
TVKALICENHDIVKYYKNSTQYTAKVYDKDGSLAIGKNVTFNINGVFYKRTVDENGTVTL
EEEEEEECCCCEEEEECCCCEEEEEEEECCCCEEECCEEEEEEEEEEEEEEECCCCEEEE
NINLNPGKYIVTAIYEGYDVGNNVVVKSVLLTDDLSMKFKDGSKFNATVLDGQGKPLANQ
EEEECCCCEEEEEEEECCCCCCCEEEEEEEEECCCEEEECCCCEEEEEEECCCCCCCCCC
TVIFNVNGVFYNKTTADNGVASLNIRLLRGEYIITSIWNSYQIGNKITIS
EEEEEECEEEEECCCCCCCEEEEEEEEEECCEEEEEECCCEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA