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The map label for this gene is xynC [H]

Identifier: 148642209

GI number: 148642209

Start: 143269

End: 144060

Strand: Reverse

Name: xynC [H]

Synonym: Msm_0149

Alternate gene names: 148642209

Gene position: 144060-143269 (Counterclockwise)

Preceding gene: 148642210

Following gene: 148642208

Centisome position: 7.77

GC content: 34.85

Gene sequence:

>792_bases
ATGGTATTGTTTAGAGGAGATATTAAGTGCAAGTCACTTCAGAGAAGAACATCATTAAGTGTAATTTTACCTGCAGACAA
TATACATTACTTGCAGGGCACTGAAGAAATAGTAGAAAAGCCATATAAAACATTGTATCTGCTGCATGGGCTTTTCGGCA
GTGATGATATATTTTTAGCAAACACTACAATTCAAAAATTTGCAGAAGACCATAATATTGCAGTTGTCCTGCCAAGTGGA
GAAAATAGCTTTTATGTGGACCAAAAAGAATCCCACAAATATTATGGGGAGTTTATAGGTCGTGAACTTGTTGAAATGAC
AAGAAACATTTTCCCACTATCTCATAAAAAAGAAGACACATATCTTGCAGGATTTTCAATGGGAGGATATGGAGCTATTA
GAAACGGATTAAAATACCATGACACTTTCGGATATATTGGAGCAATCTCTGCAGCGTTGCTGACAGATGATTTGCATAAC
TGGGGTGAAGGAGATGATTTATTGTCTTCAAAATCTTTTGCCCAGTCCTGTTTCGGAGACTTGAATAAAGTAATCGGAAG
TGACATGGACCCCAAATTTTTAATTGATGATTTGATAGCTAATGATATTGAAATTCCAAAGATTTTCATGGCAGTTGGAG
ATAATGACTTCTTGTATGATGAGAACATAGATTATTATAATTACTTAAAATCAAGAAATGTTGATGTGGAGTTCAGATGC
TCTTCAGGAGAACATACCTGGGAGTTTTGCAATGATTATATTAAAGAGTTTATAGAATGGCTCCCATTATAA

Upstream 100 bases:

>100_bases
TTAATTTGCAAATAACAGAAATAAAATGGTTGTTAAACACAACAGTTATATATTAAAAAAATTAAAAATTATGTTGTAAT
GTGCAACAGTTTGTGATATT

Downstream 100 bases:

>100_bases
AAAAGAGGAGATAATATGAAAAAATTTGGTTTTGGATCTATGAGGTTACCCTGTAATAGTGATGATCCGAAAGATATTGA
CCTGCCACAGATATTTGAAA

Product: acetylesterase

Products: NA

Alternate protein names: Acetylxylosidase [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MVLFRGDIKCKSLQRRTSLSVILPADNIHYLQGTEEIVEKPYKTLYLLHGLFGSDDIFLANTTIQKFAEDHNIAVVLPSG
ENSFYVDQKESHKYYGEFIGRELVEMTRNIFPLSHKKEDTYLAGFSMGGYGAIRNGLKYHDTFGYIGAISAALLTDDLHN
WGEGDDLLSSKSFAQSCFGDLNKVIGSDMDPKFLIDDLIANDIEIPKIFMAVGDNDFLYDENIDYYNYLKSRNVDVEFRC
SSGEHTWEFCNDYIKEFIEWLPL

Sequences:

>Translated_263_residues
MVLFRGDIKCKSLQRRTSLSVILPADNIHYLQGTEEIVEKPYKTLYLLHGLFGSDDIFLANTTIQKFAEDHNIAVVLPSG
ENSFYVDQKESHKYYGEFIGRELVEMTRNIFPLSHKKEDTYLAGFSMGGYGAIRNGLKYHDTFGYIGAISAALLTDDLHN
WGEGDDLLSSKSFAQSCFGDLNKVIGSDMDPKFLIDDLIANDIEIPKIFMAVGDNDFLYDENIDYYNYLKSRNVDVEFRC
SSGEHTWEFCNDYIKEFIEWLPL
>Mature_263_residues
MVLFRGDIKCKSLQRRTSLSVILPADNIHYLQGTEEIVEKPYKTLYLLHGLFGSDDIFLANTTIQKFAEDHNIAVVLPSG
ENSFYVDQKESHKYYGEFIGRELVEMTRNIFPLSHKKEDTYLAGFSMGGYGAIRNGLKYHDTFGYIGAISAALLTDDLHN
WGEGDDLLSSKSFAQSCFGDLNKVIGSDMDPKFLIDDLIANDIEIPKIFMAVGDNDFLYDENIDYYNYLKSRNVDVEFRC
SSGEHTWEFCNDYIKEFIEWLPL

Specific function: Unknown

COG id: COG0627

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000801 [H]

Pfam domain/function: PF00756 Esterase [H]

EC number: NA

Molecular weight: Translated: 30091; Mature: 30091

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLFRGDIKCKSLQRRTSLSVILPADNIHYLQGTEEIVEKPYKTLYLLHGLFGSDDIFLA
CEEEECCCCHHHHHHHCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEE
NTTIQKFAEDHNIAVVLPSGENSFYVDQKESHKYYGEFIGRELVEMTRNIFPLSHKKEDT
CHHHHHHHCCCCEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
YLAGFSMGGYGAIRNGLKYHDTFGYIGAISAALLTDDLHNWGEGDDLLSSKSFAQSCFGD
EEEEECCCCHHHHHCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LNKVIGSDMDPKFLIDDLIANDIEIPKIFMAVGDNDFLYDENIDYYNYLKSRNVDVEFRC
HHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCHHHHHHHCCCCEEEEE
SSGEHTWEFCNDYIKEFIEWLPL
CCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVLFRGDIKCKSLQRRTSLSVILPADNIHYLQGTEEIVEKPYKTLYLLHGLFGSDDIFLA
CEEEECCCCHHHHHHHCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEE
NTTIQKFAEDHNIAVVLPSGENSFYVDQKESHKYYGEFIGRELVEMTRNIFPLSHKKEDT
CHHHHHHHCCCCEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
YLAGFSMGGYGAIRNGLKYHDTFGYIGAISAALLTDDLHNWGEGDDLLSSKSFAQSCFGD
EEEEECCCCHHHHHCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LNKVIGSDMDPKFLIDDLIANDIEIPKIFMAVGDNDFLYDENIDYYNYLKSRNVDVEFRC
HHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCHHHHHHHCCCCEEEEE
SSGEHTWEFCNDYIKEFIEWLPL
CCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2111111 [H]