| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642205
Identifier: 148642205
GI number: 148642205
Start: 138850
End: 139278
Strand: Reverse
Name: 148642205
Synonym: Msm_0145
Alternate gene names: NA
Gene position: 139278-138850 (Counterclockwise)
Preceding gene: 148642206
Following gene: 148642204
Centisome position: 7.52
GC content: 34.5
Gene sequence:
>429_bases ATGCTTAAAGAAAATAATGGTCAAATTGCAGTTGAATATTTGTTTATATTTGCAATAGCCTTAATTATTCTGACTATATT CACTCTGCCTTTAGCCAGTCTGGCAATTGATAAAACAACAGATGTTTCCGATGCTGTAAATGTCAAATCCCAGATGTATA AAATAGCCGGCGGAATCAATCAGGTATATGGTGAAGGTCATGGCGCAAGGCAGACTGTTAATCTGGAGATGGATCAAAGC ATTAATGTCAATATCTACAAAAAACATCTCTCAGTCAGTGTAAAATTCAATGACGGGTCATCTAAGCTGATTAGAGTAAA TCATGATGCAGATGATGTCAGTGGTGTTCTGAATTTAAATAAAGGCAGAAATACACTTGTTATTGAATGGCCTGAGGATA GTGAAAATATATTTATCTCTAAAAAGTAA
Upstream 100 bases:
>100_bases TTTCCGTTTGCACCTGCAATATTTGCAGGATTCTTGATATCTGTTATTTATGGTGATTTGATGCTGCTGTTTATAAAAAA GTTCTTTCTGGTGATGTAGG
Downstream 100 bases:
>100_bases ATTATAATGTAATGTGTGAGGTTAATTTATGAGTAGTCTAGACAATGCTAAACTTAAAGAATTAATGAAAATCGAACCTG AATCTATGAGCAAAGAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MLKENNGQIAVEYLFIFAIALIILTIFTLPLASLAIDKTTDVSDAVNVKSQMYKIAGGINQVYGEGHGARQTVNLEMDQS INVNIYKKHLSVSVKFNDGSSKLIRVNHDADDVSGVLNLNKGRNTLVIEWPEDSENIFISKK
Sequences:
>Translated_142_residues MLKENNGQIAVEYLFIFAIALIILTIFTLPLASLAIDKTTDVSDAVNVKSQMYKIAGGINQVYGEGHGARQTVNLEMDQS INVNIYKKHLSVSVKFNDGSSKLIRVNHDADDVSGVLNLNKGRNTLVIEWPEDSENIFISKK >Mature_142_residues MLKENNGQIAVEYLFIFAIALIILTIFTLPLASLAIDKTTDVSDAVNVKSQMYKIAGGINQVYGEGHGARQTVNLEMDQS INVNIYKKHLSVSVKFNDGSSKLIRVNHDADDVSGVLNLNKGRNTLVIEWPEDSENIFISKK
Specific function: Unknown
COG id: COG1991
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15709; Mature: 15709
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKENNGQIAVEYLFIFAIALIILTIFTLPLASLAIDKTTDVSDAVNVKSQMYKIAGGIN CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH QVYGEGHGARQTVNLEMDQSINVNIYKKHLSVSVKFNDGSSKLIRVNHDADDVSGVLNLN HHHCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCEEEEEC KGRNTLVIEWPEDSENIFISKK CCCCEEEEECCCCCCCEEEEEC >Mature Secondary Structure MLKENNGQIAVEYLFIFAIALIILTIFTLPLASLAIDKTTDVSDAVNVKSQMYKIAGGIN CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH QVYGEGHGARQTVNLEMDQSINVNIYKKHLSVSVKFNDGSSKLIRVNHDADDVSGVLNLN HHHCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCEEEEEC KGRNTLVIEWPEDSENIFISKK CCCCEEEEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA