| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642203
Identifier: 148642203
GI number: 148642203
Start: 137149
End: 137955
Strand: Reverse
Name: 148642203
Synonym: Msm_0143
Alternate gene names: NA
Gene position: 137955-137149 (Counterclockwise)
Preceding gene: 148642204
Following gene: 148642202
Centisome position: 7.44
GC content: 33.09
Gene sequence:
>807_bases ATGGATATTTTAATTGCTATTGTATATGTTATTTTATTCATTATATTGATGGTATTTGTTTTTTCTATAGGTATGTTAAA GCCATTTATGCCTAAAAAAGAAATAGCACTTGTTCTTGTTGTAGCTTTTCTTATAGGGTCTATTGGTGGTGCCTTTTTCC TGGAGCCTTTGTATGAGGAGGTCCCGGCATTTGTCGGTGAACTTGAAAAGAATGTTCCCGGAAATGAAGAAACATTATAT TTGGATTTGTCTTCCGCCACAGATGTAGGTGAATTGGAACAGAATTTATCTAAAATCGATGGTTTTAAATCATTTAATGA AACTGGAGTAACGTTTTTCCTATGGAGTTTTAATGATAAGGAATTGGCTTATTTTAATAGTGTAATAGGCAATATTGATT CTCATTATGCAGATTATACAGTTGAACCTTCAGGCAGAATTAATATTACTTTAGAACCGGGTTACACATCCAGTTCTGCA TTGCAGTCATTTTCTGATTGGTATAAATTAGTTTATGGTGATTCTATTGCTTATGCTCAGATACATGCTAAATTGGTTGT ATCATCTGCCTCTTTAGGTGAATTTGAAGATGCTCTATTGGAAAGAGGAATTGTTGCAACTCATATTGAAGGACCAACTC AAAAGGTTGTTAATCAAACCAATCAGTCTATGATATCTGACAACGAATTCATACTGGTTTCAGGTGTTGTTGGTGTAATG GTTTCTGTTGTTGGAATTTACTTCGATGCAGTTGTTGTTAGTTATAGAAAATTCAAAAAGTTCCTTAATAAAAAGGTTAA AAGGTAG
Upstream 100 bases:
>100_bases CTTCTTTTTTCAATGGGAAATAATCCATTAATCTATCCAAAACTTATTTAAATTACTTGTTATCTTAAATAGTAATATTA TTTAATTGGCGCGTGAATTT
Downstream 100 bases:
>100_bases TATTTGATGAAGGTAGCTGTTTTATTTTCTGGAGGAAAAGACAGTACTATGGCATTATATAATGCTTTAGAAACAGGAGA AGATGTTAAATATCTTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MDILIAIVYVILFIILMVFVFSIGMLKPFMPKKEIALVLVVAFLIGSIGGAFFLEPLYEEVPAFVGELEKNVPGNEETLY LDLSSATDVGELEQNLSKIDGFKSFNETGVTFFLWSFNDKELAYFNSVIGNIDSHYADYTVEPSGRINITLEPGYTSSSA LQSFSDWYKLVYGDSIAYAQIHAKLVVSSASLGEFEDALLERGIVATHIEGPTQKVVNQTNQSMISDNEFILVSGVVGVM VSVVGIYFDAVVVSYRKFKKFLNKKVKR
Sequences:
>Translated_268_residues MDILIAIVYVILFIILMVFVFSIGMLKPFMPKKEIALVLVVAFLIGSIGGAFFLEPLYEEVPAFVGELEKNVPGNEETLY LDLSSATDVGELEQNLSKIDGFKSFNETGVTFFLWSFNDKELAYFNSVIGNIDSHYADYTVEPSGRINITLEPGYTSSSA LQSFSDWYKLVYGDSIAYAQIHAKLVVSSASLGEFEDALLERGIVATHIEGPTQKVVNQTNQSMISDNEFILVSGVVGVM VSVVGIYFDAVVVSYRKFKKFLNKKVKR >Mature_268_residues MDILIAIVYVILFIILMVFVFSIGMLKPFMPKKEIALVLVVAFLIGSIGGAFFLEPLYEEVPAFVGELEKNVPGNEETLY LDLSSATDVGELEQNLSKIDGFKSFNETGVTFFLWSFNDKELAYFNSVIGNIDSHYADYTVEPSGRINITLEPGYTSSSA LQSFSDWYKLVYGDSIAYAQIHAKLVVSSASLGEFEDALLERGIVATHIEGPTQKVVNQTNQSMISDNEFILVSGVVGVM VSVVGIYFDAVVVSYRKFKKFLNKKVKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29743; Mature: 29743
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILIAIVYVILFIILMVFVFSIGMLKPFMPKKEIALVLVVAFLIGSIGGAFFLEPLYEE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VPAFVGELEKNVPGNEETLYLDLSSATDVGELEQNLSKIDGFKSFNETGVTFFLWSFNDK HHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC ELAYFNSVIGNIDSHYADYTVEPSGRINITLEPGYTSSSALQSFSDWYKLVYGDSIAYAQ HHHHHHHHHHCHHHHCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHH IHAKLVVSSASLGEFEDALLERGIVATHIEGPTQKVVNQTNQSMISDNEFILVSGVVGVM HHHHHHCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHH VSVVGIYFDAVVVSYRKFKKFLNKKVKR HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDILIAIVYVILFIILMVFVFSIGMLKPFMPKKEIALVLVVAFLIGSIGGAFFLEPLYEE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VPAFVGELEKNVPGNEETLYLDLSSATDVGELEQNLSKIDGFKSFNETGVTFFLWSFNDK HHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC ELAYFNSVIGNIDSHYADYTVEPSGRINITLEPGYTSSSALQSFSDWYKLVYGDSIAYAQ HHHHHHHHHHCHHHHCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHH IHAKLVVSSASLGEFEDALLERGIVATHIEGPTQKVVNQTNQSMISDNEFILVSGVVGVM HHHHHHCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHH VSVVGIYFDAVVVSYRKFKKFLNKKVKR HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA