| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642165
Identifier: 148642165
GI number: 148642165
Start: 99590
End: 100684
Strand: Reverse
Name: 148642165
Synonym: Msm_0105
Alternate gene names: NA
Gene position: 100684-99590 (Counterclockwise)
Preceding gene: 148642166
Following gene: 148642164
Centisome position: 5.43
GC content: 32.97
Gene sequence:
>1095_bases ATGATGTTAATAGCTCAGAATCATTTACAACTAATCTTAGAAGTAGGGGCAATGTTATTTGTTACATTAGTCTTTTGTCT TAATTTAATTCCATTGTCACTTAGTGTTGTAACGTTTTTATCTCTCTTTTTAGCTGGTGGGTTCACACTTCTTTTTGGAG CAGATATTCTTTTACTAATAATTTCATCTAGTCAGAATGAATTTACACATCCATTTGGGCCAATTGCTTTAATGGCTATT GTTTCTGCATTTGCATCGCTGAAGGTGATGAAGAGTTCGGGAGTGGATGTACGACCTCTTAGAAAAGTTGTTTTATTGTT CCTTGCAGGTATTACCATTTTCGGTGGATTAATGCACAGATCTTTCTTAATATTATGGATATTAGGTTTGTTTATTGGAT ACATCATAATTTCCAAATCTTTCAGAGAAAAATCAGTATTTACACTTAAAAGGATTTTAATGTTTTTCGGAGCAGCTCTT GCAGGTTTTTTCGGACTTGAAATAGTAGCTAGAATAACTGGAATGACTATTTTCTCTCCATTGTTAAGGTTAGGAAGAAT TGAACAGTACTCTTCATCCAGTATTAAAATGGTATTAAATAACATCCAGCTAATCGGACATAATGGTGCTGCTTCTTTCT GGGGTACTGAAGGAACAGCATTTGCTGAAGGATATATTACCCTGCCGATGCAATTAATCATATTCTTTGGTTTGCCATTC CCATTGTTCTGCGGAGTGCTTGTAAATCAGAAAGATACAATCGATTATATGCTTCCAGGTATTTTCGGATATGGATTTGA CTTTGGTTATTTAGGTCTTGTCGGTTTAATAGTTTTTGTTTTAGGAACTATCATAATTGGTTTAAAAATATTGACCATGT ATAGGGAAAAAAGAGAAAATAATAATAAGAAATACTTAGGTAGGGAAGTGTTATTGACAGGTGCATTAACTGCATTTATT GCACAGGCATTAATCGGTATGTTTATATTTAACAGATCTATTAACGGATTAGCGTTGCTTTCATTTATCTTTTTGGGAGC ATTGATATTGGCTAATGTTGTTACACTTAAATCAAGAACTAATAAGAATATTTAA
Upstream 100 bases:
>100_bases GTAGATCGTCGCCTTGGCATGGCGGAGGCCCCGGGTTCAAATCCCGGTCAGTCCATTTATAAATTTTCAAAAAAATAAAA TTTAAAATTGTGATTAAATT
Downstream 100 bases:
>100_bases AGAGGTTGAAAAGAGATGAAAGCATTAATATTATTGGGATGTCCGGAAACCCCATCACAAACACCTATGTCAATTTATGC GTCTTATAAATTATCTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MMLIAQNHLQLILEVGAMLFVTLVFCLNLIPLSLSVVTFLSLFLAGGFTLLFGADILLLIISSSQNEFTHPFGPIALMAI VSAFASLKVMKSSGVDVRPLRKVVLLFLAGITIFGGLMHRSFLILWILGLFIGYIIISKSFREKSVFTLKRILMFFGAAL AGFFGLEIVARITGMTIFSPLLRLGRIEQYSSSSIKMVLNNIQLIGHNGAASFWGTEGTAFAEGYITLPMQLIIFFGLPF PLFCGVLVNQKDTIDYMLPGIFGYGFDFGYLGLVGLIVFVLGTIIIGLKILTMYREKRENNNKKYLGREVLLTGALTAFI AQALIGMFIFNRSINGLALLSFIFLGALILANVVTLKSRTNKNI
Sequences:
>Translated_364_residues MMLIAQNHLQLILEVGAMLFVTLVFCLNLIPLSLSVVTFLSLFLAGGFTLLFGADILLLIISSSQNEFTHPFGPIALMAI VSAFASLKVMKSSGVDVRPLRKVVLLFLAGITIFGGLMHRSFLILWILGLFIGYIIISKSFREKSVFTLKRILMFFGAAL AGFFGLEIVARITGMTIFSPLLRLGRIEQYSSSSIKMVLNNIQLIGHNGAASFWGTEGTAFAEGYITLPMQLIIFFGLPF PLFCGVLVNQKDTIDYMLPGIFGYGFDFGYLGLVGLIVFVLGTIIIGLKILTMYREKRENNNKKYLGREVLLTGALTAFI AQALIGMFIFNRSINGLALLSFIFLGALILANVVTLKSRTNKNI >Mature_364_residues MMLIAQNHLQLILEVGAMLFVTLVFCLNLIPLSLSVVTFLSLFLAGGFTLLFGADILLLIISSSQNEFTHPFGPIALMAI VSAFASLKVMKSSGVDVRPLRKVVLLFLAGITIFGGLMHRSFLILWILGLFIGYIIISKSFREKSVFTLKRILMFFGAAL AGFFGLEIVARITGMTIFSPLLRLGRIEQYSSSSIKMVLNNIQLIGHNGAASFWGTEGTAFAEGYITLPMQLIIFFGLPF PLFCGVLVNQKDTIDYMLPGIFGYGFDFGYLGLVGLIVFVLGTIIIGLKILTMYREKRENNNKKYLGREVLLTGALTAFI AQALIGMFIFNRSINGLALLSFIFLGALILANVVTLKSRTNKNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40029; Mature: 40029
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLIAQNHLQLILEVGAMLFVTLVFCLNLIPLSLSVVTFLSLFLAGGFTLLFGADILLLI CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ISSSQNEFTHPFGPIALMAIVSAFASLKVMKSSGVDVRPLRKVVLLFLAGITIFGGLMHR EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SFLILWILGLFIGYIIISKSFREKSVFTLKRILMFFGAALAGFFGLEIVARITGMTIFSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRLGRIEQYSSSSIKMVLNNIQLIGHNGAASFWGTEGTAFAEGYITLPMQLIIFFGLPF HHHHCCHHHHCCCHHHHHHHHHHEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCH PLFCGVLVNQKDTIDYMLPGIFGYGFDFGYLGLVGLIVFVLGTIIIGLKILTMYREKREN HHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NNKKYLGREVLLTGALTAFIAQALIGMFIFNRSINGLALLSFIFLGALILANVVTLKSRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC NKNI CCCC >Mature Secondary Structure MMLIAQNHLQLILEVGAMLFVTLVFCLNLIPLSLSVVTFLSLFLAGGFTLLFGADILLLI CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ISSSQNEFTHPFGPIALMAIVSAFASLKVMKSSGVDVRPLRKVVLLFLAGITIFGGLMHR EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SFLILWILGLFIGYIIISKSFREKSVFTLKRILMFFGAALAGFFGLEIVARITGMTIFSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRLGRIEQYSSSSIKMVLNNIQLIGHNGAASFWGTEGTAFAEGYITLPMQLIIFFGLPF HHHHCCHHHHCCCHHHHHHHHHHEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCH PLFCGVLVNQKDTIDYMLPGIFGYGFDFGYLGLVGLIVFVLGTIIIGLKILTMYREKREN HHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NNKKYLGREVLLTGALTAFIAQALIGMFIFNRSINGLALLSFIFLGALILANVVTLKSRT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC NKNI CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA