| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642163
Identifier: 148642163
GI number: 148642163
Start: 98812
End: 99117
Strand: Reverse
Name: 148642163
Synonym: Msm_0103
Alternate gene names: NA
Gene position: 99117-98812 (Counterclockwise)
Preceding gene: 148642164
Following gene: 148642162
Centisome position: 5.35
GC content: 34.64
Gene sequence:
>306_bases ATGTCTTTTTGTTTAGATACTTATCTTCAGCAGTCTGATAATTATGAAATTTTGGCATCACAGGCAGGCTTTAAAGATTG TGCCAGACTTATCAGATTTAAAGCTCCAGAAATCGTTTATGTCAATGCTGGAGAAGAAATTTTAGGATCTCGTGTTATTG GTATAACTCCGATTCCTATTGGTGTTGATTCAAAAAAAGGAACTGTACTTATTCCATATACCAAACCATGTTATGGTACT GCAGTTGTAGAGTTGCCGGTTGACATGGCCGAGATTGAAAAAATAAGAACATTAAATATCAAATAG
Upstream 100 bases:
>100_bases AGTGAAAATACTGATGCAGAAGTTATTTCTGTAAGAGCATTTCATAATCCAAATCCAATTAAAGTTAACCTAGATAAAGT ATTGAAGGAGTTATAATAAA
Downstream 100 bases:
>100_bases ATGAGTTTATGATTTCTACTGTTGTTGGCAGTTTTCCTGCTGAAATAAAATCTCCAACTACTGCAAAAGATAAAATATTA AATGTATTTGGAGCTTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSFCLDTYLQQSDNYEILASQAGFKDCARLIRFKAPEIVYVNAGEEILGSRVIGITPIPIGVDSKKGTVLIPYTKPCYGT AVVELPVDMAEIEKIRTLNIK
Sequences:
>Translated_101_residues MSFCLDTYLQQSDNYEILASQAGFKDCARLIRFKAPEIVYVNAGEEILGSRVIGITPIPIGVDSKKGTVLIPYTKPCYGT AVVELPVDMAEIEKIRTLNIK >Mature_100_residues SFCLDTYLQQSDNYEILASQAGFKDCARLIRFKAPEIVYVNAGEEILGSRVIGITPIPIGVDSKKGTVLIPYTKPCYGTA VVELPVDMAEIEKIRTLNIK
Specific function: Unknown
COG id: COG4033
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11153; Mature: 11022
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFCLDTYLQQSDNYEILASQAGFKDCARLIRFKAPEIVYVNAGEEILGSRVIGITPIPI CCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCHHHHCCEEEEEECCCC GVDSKKGTVLIPYTKPCYGTAVVELPVDMAEIEKIRTLNIK CCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHEEEECCC >Mature Secondary Structure SFCLDTYLQQSDNYEILASQAGFKDCARLIRFKAPEIVYVNAGEEILGSRVIGITPIPI CCCHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCHHHHCCEEEEEECCCC GVDSKKGTVLIPYTKPCYGTAVVELPVDMAEIEKIRTLNIK CCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA