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The map label for this gene is 148642154

Identifier: 148642154

GI number: 148642154

Start: 92724

End: 93314

Strand: Reverse

Name: 148642154

Synonym: Msm_0094

Alternate gene names: NA

Gene position: 93314-92724 (Counterclockwise)

Preceding gene: 148642158

Following gene: 148642153

Centisome position: 5.04

GC content: 26.57

Gene sequence:

>591_bases
ATGGAAATTGAACTAGATAAAACAGAACAGAAAATTGTTGATGCAACAATATTCCTTTTAGATAAAGAAGGAATGAACGG
CACAACAACTAAAAAAATAGCTAAAAAAGCTGAAGTTAGTGAAGTTACTGTTTTTAGAAAGTTTAAATCTAAAGATAATC
TTTTAAAAATAGCTAAGATTTATTATTCAGATTATTTCCTGGAGAAAATAAGTGATATTTTCATTAATTACGAAGATACA
GATTTGGAATCATTATTAAAGCATATATGGGGGAAACTTGTTAATTTTTTAGATAACAATCTGGATATTATTAAAATAGC
TTTAGACGAGCTGATGTCCAATCCTGAAGAGGAAAAAATATTTTCAAAATTTTCAGATGAAGTTCTTAAAAATCTAACCA
ATATTTTTCAAGAACAGATTGATAAAGGAAAAATACGTAAAATCAATCCTTCCGCAGCTGCATTAACTGTCTTTAGTGTA
ATTGTTGAAGGGATAATATTCTGGAAATTCGAATCAAAAGTTTCCAATGATGATACTAATAAGTATCTTGATGATTTTTT
AGATATATTTATTAACGGTATAACTAACTAA

Upstream 100 bases:

>100_bases
GTTATCATTAATTTTAATTATTTATTGTAATGTTATTTATAGCTATTTTTTAATAAGAAAAAACTAAACATTTATATGTA
AGTAAGTACTTACTTACATT

Downstream 100 bases:

>100_bases
AACGGTGGAACTAATGTCAATAGATAAAATATTTCATATAATGAAAAAAGATTCAAAAGCAATCTTTAAAAATCCGGCTG
TTGTTATTACAATAATAGCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator Tetr Family; TetR/AcrR Family Transcriptional Regulator; Transcription Regulator TetR/AcrR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MEIELDKTEQKIVDATIFLLDKEGMNGTTTKKIAKKAEVSEVTVFRKFKSKDNLLKIAKIYYSDYFLEKISDIFINYEDT
DLESLLKHIWGKLVNFLDNNLDIIKIALDELMSNPEEEKIFSKFSDEVLKNLTNIFQEQIDKGKIRKINPSAAALTVFSV
IVEGIIFWKFESKVSNDDTNKYLDDFLDIFINGITN

Sequences:

>Translated_196_residues
MEIELDKTEQKIVDATIFLLDKEGMNGTTTKKIAKKAEVSEVTVFRKFKSKDNLLKIAKIYYSDYFLEKISDIFINYEDT
DLESLLKHIWGKLVNFLDNNLDIIKIALDELMSNPEEEKIFSKFSDEVLKNLTNIFQEQIDKGKIRKINPSAAALTVFSV
IVEGIIFWKFESKVSNDDTNKYLDDFLDIFINGITN
>Mature_196_residues
MEIELDKTEQKIVDATIFLLDKEGMNGTTTKKIAKKAEVSEVTVFRKFKSKDNLLKIAKIYYSDYFLEKISDIFINYEDT
DLESLLKHIWGKLVNFLDNNLDIIKIALDELMSNPEEEKIFSKFSDEVLKNLTNIFQEQIDKGKIRKINPSAAALTVFSV
IVEGIIFWKFESKVSNDDTNKYLDDFLDIFINGITN

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22682; Mature: 22682

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIELDKTEQKIVDATIFLLDKEGMNGTTTKKIAKKAEVSEVTVFRKFKSKDNLLKIAKI
CCCCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YYSDYFLEKISDIFINYEDTDLESLLKHIWGKLVNFLDNNLDIIKIALDELMSNPEEEKI
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH
FSKFSDEVLKNLTNIFQEQIDKGKIRKINPSAAALTVFSVIVEGIIFWKFESKVSNDDTN
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCCHH
KYLDDFLDIFINGITN
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEIELDKTEQKIVDATIFLLDKEGMNGTTTKKIAKKAEVSEVTVFRKFKSKDNLLKIAKI
CCCCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
YYSDYFLEKISDIFINYEDTDLESLLKHIWGKLVNFLDNNLDIIKIALDELMSNPEEEKI
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH
FSKFSDEVLKNLTNIFQEQIDKGKIRKINPSAAALTVFSVIVEGIIFWKFESKVSNDDTN
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCCHH
KYLDDFLDIFINGITN
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA