| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642108
Identifier: 148642108
GI number: 148642108
Start: 36436
End: 36765
Strand: Reverse
Name: 148642108
Synonym: Msm_0048
Alternate gene names: NA
Gene position: 36765-36436 (Counterclockwise)
Preceding gene: 148642109
Following gene: 148642106
Centisome position: 1.98
GC content: 32.12
Gene sequence:
>330_bases ATGAAAAAAGTAAAAATAACAGTTTTAAAAACAACATTCCAAGAGGATTTGGCTAAAGAATATGGTATTGATGATTTGGG AGTATGTCCGATTCTAAATGAAGGTGAAGTTTATTATGGGGATTGGGCAAAGCCTGAAGGCTTTTGTGATGAAGCATGGA AAGCAATATATCAGTATGTATTTGCATTGTCTCACGGTGTTGATAATTTATTTTATTATGGGGATTGGATTAAAAAACCA GGTATAGCTATTGTCAGTTGTAATGATGGGTTAAGGCCAGTTATATTTAAATTGGAAACTACTGATATTGAATCTACTTC AGATGATTAA
Upstream 100 bases:
>100_bases TAATTGGTATGAACATTAAATTCAAATCTCATTATGGTGGATTTAGAATAACTGGTATTGATTTTGAATAAAATCTTTAC CTTATTTTTTTTGAATTACA
Downstream 100 bases:
>100_bases AGTTTTCCTGTGCTTTTTTGTAAAATAATCCTAATTCTCTGCCATTAACAAAAATATGGCTTACAGTAATAGCTACACTC ATTTCATAGTTTTTATTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKKVKITVLKTTFQEDLAKEYGIDDLGVCPILNEGEVYYGDWAKPEGFCDEAWKAIYQYVFALSHGVDNLFYYGDWIKKP GIAIVSCNDGLRPVIFKLETTDIESTSDD
Sequences:
>Translated_109_residues MKKVKITVLKTTFQEDLAKEYGIDDLGVCPILNEGEVYYGDWAKPEGFCDEAWKAIYQYVFALSHGVDNLFYYGDWIKKP GIAIVSCNDGLRPVIFKLETTDIESTSDD >Mature_109_residues MKKVKITVLKTTFQEDLAKEYGIDDLGVCPILNEGEVYYGDWAKPEGFCDEAWKAIYQYVFALSHGVDNLFYYGDWIKKP GIAIVSCNDGLRPVIFKLETTDIESTSDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12368; Mature: 12368
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVKITVLKTTFQEDLAKEYGIDDLGVCPILNEGEVYYGDWAKPEGFCDEAWKAIYQYV CCCEEEEEEEHHHHHHHHHHCCCCCCCCCEEECCCCEEECCCCCCCCCHHHHHHHHHHHH FALSHGVDNLFYYGDWIKKPGIAIVSCNDGLRPVIFKLETTDIESTSDD HHHHCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MKKVKITVLKTTFQEDLAKEYGIDDLGVCPILNEGEVYYGDWAKPEGFCDEAWKAIYQYV CCCEEEEEEEHHHHHHHHHHCCCCCCCCCEEECCCCEEECCCCCCCCCHHHHHHHHHHHH FALSHGVDNLFYYGDWIKKPGIAIVSCNDGLRPVIFKLETTDIESTSDD HHHHCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA