| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642095
Identifier: 148642095
GI number: 148642095
Start: 26519
End: 27097
Strand: Reverse
Name: 148642095
Synonym: Msm_0035
Alternate gene names: NA
Gene position: 27097-26519 (Counterclockwise)
Preceding gene: 148642096
Following gene: 148642094
Centisome position: 1.46
GC content: 32.82
Gene sequence:
>579_bases ATGTTTTCAAAAAAGCTTTTCTTATCATTACTTTTAATTGCTTTAATTATATCTGTTGGTTGTGTTAATGCAGTTGACAG TTCCAATTGGAAAACTGTAAAGGTAAATGATGTAGATTTTAAAATTCCTCCAAAATATCAGGGCGGAGAAATCAATACTG CCCGTACTAATTATCATTATAATGACCTGAACACATTTGGTATATTATGTGTTGATGATTATCTTCCAAGCAGTTACGGG TGCTGGTATAATTTCAAAGGCAAAAACCTGACTATAGGTTCACATGATGTGGCATACTTCCATGAGTATAATAACTTTGC AAAACATAATGTGTCCCATGCTTATTTTTCATCAGGAGATTCGATATACTGTATATCATGGGGCAGCGGAGAAATGACTG ATGAAATGGAAGAAATCATAATCAACACTCCTGATTCTTCCTATGACACAGCTACATTTTACGGAATATTAAATGAAGCA AAACAGGACTATGAAAAGGAAATGGTAAAGGAATATTCATATTATGCTCCGGCACCAAGTAAAGAAAGAAATAATTATTT TATATTCTGGAGATATTGA
Upstream 100 bases:
>100_bases CATATATTATTTTTATTTTTTAGATATATAAACTTTTATAATCGATTTTAAAATGTTTGTTAATAAAATGTTATATACTA GTTAGTACAAATAGATTAGT
Downstream 100 bases:
>100_bases AAAGGTGATTAAATGAAAGAATGTCCAAAATGCGGCAGTAAATATGGAGATAATAACAGCAATTATTGTATTGACTGCGG ATCAAGACTTTTTGATTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MFSKKLFLSLLLIALIISVGCVNAVDSSNWKTVKVNDVDFKIPPKYQGGEINTARTNYHYNDLNTFGILCVDDYLPSSYG CWYNFKGKNLTIGSHDVAYFHEYNNFAKHNVSHAYFSSGDSIYCISWGSGEMTDEMEEIIINTPDSSYDTATFYGILNEA KQDYEKEMVKEYSYYAPAPSKERNNYFIFWRY
Sequences:
>Translated_192_residues MFSKKLFLSLLLIALIISVGCVNAVDSSNWKTVKVNDVDFKIPPKYQGGEINTARTNYHYNDLNTFGILCVDDYLPSSYG CWYNFKGKNLTIGSHDVAYFHEYNNFAKHNVSHAYFSSGDSIYCISWGSGEMTDEMEEIIINTPDSSYDTATFYGILNEA KQDYEKEMVKEYSYYAPAPSKERNNYFIFWRY >Mature_192_residues MFSKKLFLSLLLIALIISVGCVNAVDSSNWKTVKVNDVDFKIPPKYQGGEINTARTNYHYNDLNTFGILCVDDYLPSSYG CWYNFKGKNLTIGSHDVAYFHEYNNFAKHNVSHAYFSSGDSIYCISWGSGEMTDEMEEIIINTPDSSYDTATFYGILNEA KQDYEKEMVKEYSYYAPAPSKERNNYFIFWRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22179; Mature: 22179
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKKLFLSLLLIALIISVGCVNAVDSSNWKTVKVNDVDFKIPPKYQGGEINTARTNYHY CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEECCCCCCCCEEEEEECCEEE NDLNTFGILCVDDYLPSSYGCWYNFKGKNLTIGSHDVAYFHEYNNFAKHNVSHAYFSSGD CCCCEEEEEEEECCCCCCCCCEEEECCCEEEECCCCEEEEEHHCCHHHCCCCEEEECCCC SIYCISWGSGEMTDEMEEIIINTPDSSYDTATFYGILNEAKQDYEKEMVKEYSYYAPAPS EEEEEEECCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KERNNYFIFWRY CCCCCEEEEEEC >Mature Secondary Structure MFSKKLFLSLLLIALIISVGCVNAVDSSNWKTVKVNDVDFKIPPKYQGGEINTARTNYHY CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEECCCCCCCCEEEEEECCEEE NDLNTFGILCVDDYLPSSYGCWYNFKGKNLTIGSHDVAYFHEYNNFAKHNVSHAYFSSGD CCCCEEEEEEEECCCCCCCCCEEEECCCEEEECCCCEEEEEHHCCHHHCCCCEEEECCCC SIYCISWGSGEMTDEMEEIIINTPDSSYDTATFYGILNEAKQDYEKEMVKEYSYYAPAPS EEEEEEECCCCCHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KERNNYFIFWRY CCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA