Definition Sphingomonas wittichii RW1 chromosome, complete genome.
Accession NC_009511
Length 5,382,261

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Identifier: 148553097

GI number:

Start: 162132

End: 163319

Strand: Direct

Name: Not Available

Synonym: Swit_0170

Alternate gene names: NA

Gene position: NA

Preceding gene: 148553096

Following gene: 148553099

Centisome position: NA

GC content: NA

Gene sequence:

>1188_bases
ATGGACCACCGGCACGATCCAAGCGATCCGGCGCAGCCGCGCGCGCCGCTTTCGACCCGCGCCACGCCGCCCCGGCCGCG
CCGCTTGTCGCGCAAGGCAATCGCGTTGCTGTCCGGTGCGGGAGCATTCGCGGTGGCGGGTGCGCTCGCCTACAGCCTGT
CGGGCACGTCAGGCCAACGCGGGCCACAAGAGACGGTGTCGGTCGAGCGCCGCCAGGCGGAGCTGCTGAGCGATGCGCCG
CGTGACTATAGCGAGTTGGCGGAACGATCGGCGGAAGGAATGGGACCGCCCGCGCCGATGACGCCGGACCCCGAGCCGAC
ATTCGGCGGCACCGAAAGCGGCGCGGCGCCATCCACCACCGAAGCCGACCAGGCCGAGCAGCGCCGCCGCCAGCAGGCCG
AGAGTGCGCGCGGCAGCCGGCTGTTCGCCGGCGCCGGCGAGGGACGCGGTCCGCCCCAAGCAGCGAACGCCACGCCCACC
GAACCTGCTCCGGCGCCGCCGGCCGAGGGCACGTCACGAGCGGGCGCACCGCTCGACCGCCGCGCCGCGTTCGTCGCCGG
GGGAACGCCCGAGCCTACCACCAACAGCGGCCGCCTCACGCCTCCTCCCGGCCGCCATGTCGTGACCGCCGGCTCGACGA
TCGCCGCGGCGCTGATCACCGGGCTTTCGTCCGACCTTGCGGGCCAGGTCGTCGCGCAGGTGACCGAGGACGTATTCGAT
TCCGTGACCGGACGGACGAAGCTCATTCCGCAGGGAACGCGGCTGCTTGGAGTCTATGATTCGAATGTCAGCACCGGCCA
GTCCCGCGCGCTGGTCGTGTGGACGCGGATGATCCTGCCGGACGGGCGCAGCATCGGTCTCGATCGCCTGGTTGGCACCG
ATGCGGCCGGTCAATCGGGATTTGCCGACCGGGTCAACAATCACTGGGGCACGATTCTGCGCGCCGGTTTGCTTTCGACG
CTACTCGGGGTCGGCACGCAGGCGAGCGGGTTCGGCCAGAATGACGCAATCGCCGACGCGATCCGCGACAGTGCCGGCCA
GACGGTTGGCCGCGCCGGTGACCGGATCGTCGAGCGCCAGCTTGGAATACAGCCGACCATCAGCGTGCGCCCCGGTGCGC
GGGTTCGCGTACTCGTAAGCCGGGATTTGATATTGGAGCCGTGGCCGGGTCGCGACGCCGGCGGTTGA

Upstream 100 bases:

>100_bases
TCGTCGACCGCCTGTTCGAGCGCGCCGAGTTCCGCCTCGGCACGCGGCGGCAGGAGATCGTTCGCATCGAGCGCACGCGC
GCCCGGGAGCGGCAGCAGTG

Downstream 100 bases:

>100_bases
ATCGCCTCAGACTTGTGACGGAGCGAGCGGTGCGCGGCGTTCGATCTCGCGCAGCTCGGAAAGGGCGTGATCCAGGTAGA
GAGCCGCCATTTCTTCGCTC

Product: conjugation TrbI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>395_residues
MDHRHDPSDPAQPRAPLSTRATPPRPRRLSRKAIALLSGAGAFAVAGALAYSLSGTSGQRGPQETVSVERRQAELLSDAP
RDYSELAERSAEGMGPPAPMTPDPEPTFGGTESGAAPSTTEADQAEQRRRQQAESARGSRLFAGAGEGRGPPQAANATPT
EPAPAPPAEGTSRAGAPLDRRAAFVAGGTPEPTTNSGRLTPPPGRHVVTAGSTIAAALITGLSSDLAGQVVAQVTEDVFD
SVTGRTKLIPQGTRLLGVYDSNVSTGQSRALVVWTRMILPDGRSIGLDRLVGTDAAGQSGFADRVNNHWGTILRAGLLST
LLGVGTQASGFGQNDAIADAIRDSAGQTVGRAGDRIVERQLGIQPTISVRPGARVRVLVSRDLILEPWPGRDAGG

Sequences:
NA

Specific function: NA

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA