| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is pgcA [H]
Identifier: 148381556
GI number: 148381556
Start: 3860672
End: 3862393
Strand: Reverse
Name: pgcA [H]
Synonym: CBO3619
Alternate gene names: 148381556
Gene position: 3862393-3860672 (Counterclockwise)
Preceding gene: 148381557
Following gene: 148381555
Centisome position: 99.37
GC content: 28.98
Gene sequence:
>1722_bases ATGGATTACAAAAAAGTATATAAAGAATGGTTAGATAATGATTATATTGATGAAGATATAAAAAAAGAATTGAAGGAGAT AATAAATAATGAAAAGGAAATAGAAGATAGATTTTATAAAGAATTAGAATTTGGAACTGCAGGCCTTAGAGGAAAAATCG GAGCAGGTACAAATAGAATGAATATATACAATATATCTAAGGTTACTCAGGGATTAGCAGATTATATAACAGAAAAAGGT GAAGAATATATAAATAGGGGTGTTGCTATAGCTTTTGATTGCAGACATTATTCAAAAGAATTTGCTAAAACTGCAGCCTT AGTTTTGGCTGGTAATGGAATAAAGAGTTATTTATTTGAAGATTTAAGACCAACCCCAGAATTATCTTTTGCAGTTAGAA AATTGAATACGGCTGCAGGTATAGTTATAACTGCAAGTCATAATCCAAAGGATTATAATGGTTATAAAGTATATTGGGAA GATGGTGCTCAGGTTTTATCTAAAATAGCAAATGGTATTACTGAGAAAATAAAATCTATTGGTAAATTTAGTGATATAAA AACTATAAGTGAGGAAAAAGCTTTAAAAAGTGGGTTATTAAATATATTAGGAGAAGATATAGATTTTGAATATATAGAAA GGGTTAAATCTTTAAGTATAAGAGAAGATATCGATAAGGATATAAAAGTTATTTATACACCTTTAAATGGAACAGGAAAT ATTCCTGTTAGACGTGTTTTAAAAGAAAGAGGGTTTACTAATATTATAGTAGTTCCAGAGCAGGAAAACCCTGATCCAGA CTTTACAACAGTAGGATATCCAAACCCAGAGGATACAAAAGCATTTAGATATGCAGAAAACTTAGGAAAAAAAGTAGATG CAGAATTACTTATAGCAACAGATCCCGATTGTGATAGATTAGCTATAGAGGTTAAAGATAAAAATGGTGAGTATTTAGCC TTTAATGGTAATCAAACAGGAGCTATTCTTATAAATTATATAGTATCAAATATGAAAGAGATGGGTAAATTACCTAAGGG TGCTGCTATAGTTAAATCCATAGTTACTGGGGATTTAGGTAAAGTTATTGGAGAAGAATACGGAGTAGAAACCTATGAAG CATTAACTGGATTTAAAAACATATGTGGTAAAATACCTAATTTAAAAGAAGAAGGTAAAGAATTTATATTCGGATATGAA GAAAGTATAGGTTATGTTACAGGTACATTTGTTAGAGATAAAGATGGAGTAAGTTCAAGTATGCTTTTATGTGAGGCAGC AGCTTATTATAAAACTAAGGGTAAAACATTAATAGATGTGCTTAATGAAATATATGAAAAGCATGGATATTATAGAGAAA AACAAATATCACTAATATTAGAAGGGATAGAGGGTAAAAAGAGAATAGATAGAATGATGGAATCATATAGGAAAAGTTTC CCGAAGGAAATAGCAGGAGCAAAGCTTTTAACTTATATAGATTATCAAGATAGAATAGAATACGATATTATAAAAAATGA TAGAAAACCATGTAAAATACCTAGATCAAATGTATTAAGATTTTTCTTAGATGATGGCAGTTGGTATGCAGTAAGGCCAT CTGGTACAGAACCTAAAATAAAATTATATGTATATACAAAAGGTAAAAGTATTAAAGCTGCTGAAGAAAAAATAAAAGCT ATAGAAAAGGAAGTTTTAGATAAACTTAATTCAGTAAAATAG
Upstream 100 bases:
>100_bases GAGTATATAAAATAATATTATTTAAGAAGGAAATACATAAAAAATATTGAAATTAATAATTAATGGAATAAAAGCTTTCA GTTAAGAGGAGAGATAATAT
Downstream 100 bases:
>100_bases ATTAATTTAATAAAATTTTATATAATAGTAAGATATTTTAATATTATGATATGTGTTTTTGATTAAAAATAAAGAAAAGA TTATTTTATAGAAATAATAA
Product: phosphoglucomutase/phosphomannomutase family protein
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MDYKKVYKEWLDNDYIDEDIKKELKEIINNEKEIEDRFYKELEFGTAGLRGKIGAGTNRMNIYNISKVTQGLADYITEKG EEYINRGVAIAFDCRHYSKEFAKTAALVLAGNGIKSYLFEDLRPTPELSFAVRKLNTAAGIVITASHNPKDYNGYKVYWE DGAQVLSKIANGITEKIKSIGKFSDIKTISEEKALKSGLLNILGEDIDFEYIERVKSLSIREDIDKDIKVIYTPLNGTGN IPVRRVLKERGFTNIIVVPEQENPDPDFTTVGYPNPEDTKAFRYAENLGKKVDAELLIATDPDCDRLAIEVKDKNGEYLA FNGNQTGAILINYIVSNMKEMGKLPKGAAIVKSIVTGDLGKVIGEEYGVETYEALTGFKNICGKIPNLKEEGKEFIFGYE ESIGYVTGTFVRDKDGVSSSMLLCEAAAYYKTKGKTLIDVLNEIYEKHGYYREKQISLILEGIEGKKRIDRMMESYRKSF PKEIAGAKLLTYIDYQDRIEYDIIKNDRKPCKIPRSNVLRFFLDDGSWYAVRPSGTEPKIKLYVYTKGKSIKAAEEKIKA IEKEVLDKLNSVK
Sequences:
>Translated_573_residues MDYKKVYKEWLDNDYIDEDIKKELKEIINNEKEIEDRFYKELEFGTAGLRGKIGAGTNRMNIYNISKVTQGLADYITEKG EEYINRGVAIAFDCRHYSKEFAKTAALVLAGNGIKSYLFEDLRPTPELSFAVRKLNTAAGIVITASHNPKDYNGYKVYWE DGAQVLSKIANGITEKIKSIGKFSDIKTISEEKALKSGLLNILGEDIDFEYIERVKSLSIREDIDKDIKVIYTPLNGTGN IPVRRVLKERGFTNIIVVPEQENPDPDFTTVGYPNPEDTKAFRYAENLGKKVDAELLIATDPDCDRLAIEVKDKNGEYLA FNGNQTGAILINYIVSNMKEMGKLPKGAAIVKSIVTGDLGKVIGEEYGVETYEALTGFKNICGKIPNLKEEGKEFIFGYE ESIGYVTGTFVRDKDGVSSSMLLCEAAAYYKTKGKTLIDVLNEIYEKHGYYREKQISLILEGIEGKKRIDRMMESYRKSF PKEIAGAKLLTYIDYQDRIEYDIIKNDRKPCKIPRSNVLRFFLDDGSWYAVRPSGTEPKIKLYVYTKGKSIKAAEEKIKA IEKEVLDKLNSVK >Mature_573_residues MDYKKVYKEWLDNDYIDEDIKKELKEIINNEKEIEDRFYKELEFGTAGLRGKIGAGTNRMNIYNISKVTQGLADYITEKG EEYINRGVAIAFDCRHYSKEFAKTAALVLAGNGIKSYLFEDLRPTPELSFAVRKLNTAAGIVITASHNPKDYNGYKVYWE DGAQVLSKIANGITEKIKSIGKFSDIKTISEEKALKSGLLNILGEDIDFEYIERVKSLSIREDIDKDIKVIYTPLNGTGN IPVRRVLKERGFTNIIVVPEQENPDPDFTTVGYPNPEDTKAFRYAENLGKKVDAELLIATDPDCDRLAIEVKDKNGEYLA FNGNQTGAILINYIVSNMKEMGKLPKGAAIVKSIVTGDLGKVIGEEYGVETYEALTGFKNICGKIPNLKEEGKEFIFGYE ESIGYVTGTFVRDKDGVSSSMLLCEAAAYYKTKGKTLIDVLNEIYEKHGYYREKQISLILEGIEGKKRIDRMMESYRKSF PKEIAGAKLLTYIDYQDRIEYDIIKNDRKPCKIPRSNVLRFFLDDGSWYAVRPSGTEPKIKLYVYTKGKSIKAAEEKIKA IEKEVLDKLNSVK
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=564, Percent_Identity=34.3971631205674, Blast_Score=308, Evalue=1e-83, Organism=Homo sapiens, GI31377548, Length=585, Percent_Identity=33.5042735042735, Blast_Score=280, Evalue=3e-75, Organism=Caenorhabditis elegans, GI71993870, Length=586, Percent_Identity=33.9590443686007, Blast_Score=281, Evalue=5e-76, Organism=Caenorhabditis elegans, GI71993878, Length=318, Percent_Identity=35.5345911949685, Blast_Score=171, Evalue=9e-43, Organism=Saccharomyces cerevisiae, GI6323934, Length=550, Percent_Identity=32.9090909090909, Blast_Score=248, Evalue=2e-66, Organism=Drosophila melanogaster, GI20129809, Length=534, Percent_Identity=30.5243445692884, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI24651977, Length=429, Percent_Identity=32.8671328671329, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24653722, Length=466, Percent_Identity=32.8326180257511, Blast_Score=213, Evalue=4e-55, Organism=Drosophila melanogaster, GI17864244, Length=549, Percent_Identity=23.6794171220401, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 64871; Mature: 64871
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYKKVYKEWLDNDYIDEDIKKELKEIINNEKEIEDRFYKELEFGTAGLRGKIGAGTNRM CCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE NIYNISKVTQGLADYITEKGEEYINRGVAIAFDCRHYSKEFAKTAALVLAGNGIKSYLFE EEEEHHHHHHHHHHHHHHCCHHHHHCCCEEEEEHHHHHHHHHHHHHHEEECCCHHHHHHH DLRPTPELSFAVRKLNTAAGIVITASHNPKDYNGYKVYWEDGAQVLSKIANGITEKIKSI HCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH GKFSDIKTISEEKALKSGLLNILGEDIDFEYIERVKSLSIREDIDKDIKVIYTPLNGTGN HCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC IPVRRVLKERGFTNIIVVPEQENPDPDFTTVGYPNPEDTKAFRYAENLGKKVDAELLIAT CHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEC DPDCDRLAIEVKDKNGEYLAFNGNQTGAILINYIVSNMKEMGKLPKGAAIVKSIVTGDLG CCCCCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KVIGEEYGVETYEALTGFKNICGKIPNLKEEGKEFIFGYEESIGYVTGTFVRDKDGVSSS HHHHHHHCCHHHHHHHHHHHHHCCCCCCHHCCHHEEEEHHHCCCCEEEEEEECCCCCCHH MLLCEAAAYYKTKGKTLIDVLNEIYEKHGYYREKQISLILEGIEGKKRIDRMMESYRKSF HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC PKEIAGAKLLTYIDYQDRIEYDIIKNDRKPCKIPRSNVLRFFLDDGSWYAVRPSGTEPKI CHHHCCCCEEEEECHHHCCCCHHHCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCEE KLYVYTKGKSIKAAEEKIKAIEKEVLDKLNSVK EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDYKKVYKEWLDNDYIDEDIKKELKEIINNEKEIEDRFYKELEFGTAGLRGKIGAGTNRM CCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE NIYNISKVTQGLADYITEKGEEYINRGVAIAFDCRHYSKEFAKTAALVLAGNGIKSYLFE EEEEHHHHHHHHHHHHHHCCHHHHHCCCEEEEEHHHHHHHHHHHHHHEEECCCHHHHHHH DLRPTPELSFAVRKLNTAAGIVITASHNPKDYNGYKVYWEDGAQVLSKIANGITEKIKSI HCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH GKFSDIKTISEEKALKSGLLNILGEDIDFEYIERVKSLSIREDIDKDIKVIYTPLNGTGN HCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC IPVRRVLKERGFTNIIVVPEQENPDPDFTTVGYPNPEDTKAFRYAENLGKKVDAELLIAT CHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEC DPDCDRLAIEVKDKNGEYLAFNGNQTGAILINYIVSNMKEMGKLPKGAAIVKSIVTGDLG CCCCCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KVIGEEYGVETYEALTGFKNICGKIPNLKEEGKEFIFGYEESIGYVTGTFVRDKDGVSSS HHHHHHHCCHHHHHHHHHHHHHCCCCCCHHCCHHEEEEHHHCCCCEEEEEEECCCCCCHH MLLCEAAAYYKTKGKTLIDVLNEIYEKHGYYREKQISLILEGIEGKKRIDRMMESYRKSF HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC PKEIAGAKLLTYIDYQDRIEYDIIKNDRKPCKIPRSNVLRFFLDDGSWYAVRPSGTEPKI CHHHCCCCEEEEECHHHCCCCHHHCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCEE KLYVYTKGKSIKAAEEKIKAIEKEVLDKLNSVK EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]