| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is yjjI [C]
Identifier: 148381516
GI number: 148381516
Start: 3821508
End: 3823013
Strand: Direct
Name: yjjI [C]
Synonym: CBO3578
Alternate gene names: 148381516
Gene position: 3821508-3823013 (Clockwise)
Preceding gene: 148381514
Following gene: 148381517
Centisome position: 98.32
GC content: 30.41
Gene sequence:
>1506_bases ATGAGAGTTTTGGATAACACTTTAAATATAATAAAAAATAAAACTTTAACTTATGAACAAAAGGTTTTATCTCTTGCTCG CGAAGCTGAAAATTCATTAGATGTCCTTAACCTTCCTTCAGACGTGCAAAGTTTAAGGGATGAGGGCGTTATATGTGATT TAAATGAAGGTAATGCACCTTATAGACCTAGATATATTTGTCCTGATTATGAAAAATTTATGAAACAAGGTAGTGAATTT CTTAACTTAAATCCTCCAAAGGATATTTGGGAAGCCACAAATAACTTACTTATTTTGTATAAACATGTTCCTTCTATAAC CTCTATGCCTGTTTATATAGGAAATATTGATACTCTTTTAGATCCTTTTATATCAGATGAAAATGAGGCTTATAATGCAA TAAAGCTATTTTTACTTCATATAGATAGAACCATAACGGATTCTTTTTGTCACGCTAATATAGGTCCTAAAGAAACTAAA GCCGGAAGACTTATATTAAAAGCTCAAAGAGAACTTCAAACTGCTATACCAAACATAACTTTAAAATATGGAAAAGAAAC TTCAAAAGAATTTGCTATTGACTCTATAAATACAGCTCTGATTACAGCTAAACCTAGTTTTGCAAATCATGAAATATTTT CAAAGGACTTTCCTTACAACAATTATGGTATAGCTAGTTGCTATAATGGCTTGTATATAGGTGGTGGTAGCTTTACTCTT GTAAGACTTAATCTTTATGGTGCTGCTAAAAAAGCTTCATCTATAGAAGATTTCTTGGATAATGTTTTACCTAATGTTAT GACAAAAATGAGTAATTATATAGATAAAAGAATAAATTTTATAGTAAATGAAAGTAATTTTTTCGAAAGTAGCTTTTTAG TAAGAGAAAAATTAATACACAAGGATAGATTTACAGCTATGTTTGGTATGTTTGGATTAGCTGAATGCGTTAATCATTTA TTAAAAACCAGTGAGCTAAAAGATAGATTTGGTCATAGCGAAAAAGCTAATGAACTAGGTATAAAAATAATAGAGAAAAT GTACAACATAGTAAATAGCAATGTAAATGAGTATTGTTCAGCTACAGATGGTCACTTTTTACTACATGCACAAGTAGGTA TAGAAACAGACAAAGGAACAAGTCCAGGTTGCAGAATACCTATTGGCGAGGAACCAAATTTACCTATTCATCTGCTACAA AGTGCTAAATTTCATAGATACTTTCCATCTGGTATAGGTGATATATTCCCATTTGAATCTACTGCAAAGAAAAATCCTGA ATCTATATTAGACATAATAAATGGAGCTTTTAATGAAGGAATGAGATACTTCTCTCTTTACGCCTCTGATAGCGATGTAA TAAGAATAACAGGTTATCTTGTTAAATTATCTGATATTAAAAAATTAGATAAAGGCGAGCAAGTTCTTCAAGACACAGTA GCTTTAGGTTTAGGTGCAGTTAAAAATTCTAGAATACTGGAAAGAAAGGTAAGAGATGATGCTTAG
Upstream 100 bases:
>100_bases ATTTATCAACTGTATTGTAAGATCAAAAGAAAATGTTTGCAGAAAAAATTATTTAAATATAAAATGATTAATATAACATA TTATAAATTTATATTAGGAG
Downstream 100 bases:
>100_bases AGGATTAGTTAACAAAATAATACCTTTTAGTTCTGTAGATGGTCCTGGAAACAGGACCGCTATATTTTTTCAGGGATGTA ATTTTGATTGTAAATATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MRVLDNTLNIIKNKTLTYEQKVLSLAREAENSLDVLNLPSDVQSLRDEGVICDLNEGNAPYRPRYICPDYEKFMKQGSEF LNLNPPKDIWEATNNLLILYKHVPSITSMPVYIGNIDTLLDPFISDENEAYNAIKLFLLHIDRTITDSFCHANIGPKETK AGRLILKAQRELQTAIPNITLKYGKETSKEFAIDSINTALITAKPSFANHEIFSKDFPYNNYGIASCYNGLYIGGGSFTL VRLNLYGAAKKASSIEDFLDNVLPNVMTKMSNYIDKRINFIVNESNFFESSFLVREKLIHKDRFTAMFGMFGLAECVNHL LKTSELKDRFGHSEKANELGIKIIEKMYNIVNSNVNEYCSATDGHFLLHAQVGIETDKGTSPGCRIPIGEEPNLPIHLLQ SAKFHRYFPSGIGDIFPFESTAKKNPESILDIINGAFNEGMRYFSLYASDSDVIRITGYLVKLSDIKKLDKGEQVLQDTV ALGLGAVKNSRILERKVRDDA
Sequences:
>Translated_501_residues MRVLDNTLNIIKNKTLTYEQKVLSLAREAENSLDVLNLPSDVQSLRDEGVICDLNEGNAPYRPRYICPDYEKFMKQGSEF LNLNPPKDIWEATNNLLILYKHVPSITSMPVYIGNIDTLLDPFISDENEAYNAIKLFLLHIDRTITDSFCHANIGPKETK AGRLILKAQRELQTAIPNITLKYGKETSKEFAIDSINTALITAKPSFANHEIFSKDFPYNNYGIASCYNGLYIGGGSFTL VRLNLYGAAKKASSIEDFLDNVLPNVMTKMSNYIDKRINFIVNESNFFESSFLVREKLIHKDRFTAMFGMFGLAECVNHL LKTSELKDRFGHSEKANELGIKIIEKMYNIVNSNVNEYCSATDGHFLLHAQVGIETDKGTSPGCRIPIGEEPNLPIHLLQ SAKFHRYFPSGIGDIFPFESTAKKNPESILDIINGAFNEGMRYFSLYASDSDVIRITGYLVKLSDIKKLDKGEQVLQDTV ALGLGAVKNSRILERKVRDDA >Mature_501_residues MRVLDNTLNIIKNKTLTYEQKVLSLAREAENSLDVLNLPSDVQSLRDEGVICDLNEGNAPYRPRYICPDYEKFMKQGSEF LNLNPPKDIWEATNNLLILYKHVPSITSMPVYIGNIDTLLDPFISDENEAYNAIKLFLLHIDRTITDSFCHANIGPKETK AGRLILKAQRELQTAIPNITLKYGKETSKEFAIDSINTALITAKPSFANHEIFSKDFPYNNYGIASCYNGLYIGGGSFTL VRLNLYGAAKKASSIEDFLDNVLPNVMTKMSNYIDKRINFIVNESNFFESSFLVREKLIHKDRFTAMFGMFGLAECVNHL LKTSELKDRFGHSEKANELGIKIIEKMYNIVNSNVNEYCSATDGHFLLHAQVGIETDKGTSPGCRIPIGEEPNLPIHLLQ SAKFHRYFPSGIGDIFPFESTAKKNPESILDIINGAFNEGMRYFSLYASDSDVIRITGYLVKLSDIKKLDKGEQVLQDTV ALGLGAVKNSRILERKVRDDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjjI [H]
Homologues:
Organism=Escherichia coli, GI1790840, Length=493, Percent_Identity=43.2048681541582, Blast_Score=413, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016905 [H]
Pfam domain/function: PF11230 DUF3029 [H]
EC number: NA
Molecular weight: Translated: 56404; Mature: 56404
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLDNTLNIIKNKTLTYEQKVLSLAREAENSLDVLNLPSDVQSLRDEGVICDLNEGNAP CCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCEEEECCCCCCC YRPRYICPDYEKFMKQGSEFLNLNPPKDIWEATNNLLILYKHVPSITSMPVYIGNIDTLL CCCCCCCCCHHHHHHCCCCEECCCCCHHHHHCCCCEEEEEECCCCCCCCCEEECCHHHHH DPFISDENEAYNAIKLFLLHIDRTITDSFCHANIGPKETKAGRLILKAQRELQTAIPNIT HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCE LKYGKETSKEFAIDSINTALITAKPSFANHEIFSKDFPYNNYGIASCYNGLYIGGGSFTL EECCCCCCHHHHHHCCCEEEEEECCCCCCCCHHCCCCCCCCCCHHHHCCCEEEECCCEEE VRLNLYGAAKKASSIEDFLDNVLPNVMTKMSNYIDKRINFIVNESNFFESSFLVREKLIH EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH KDRFTAMFGMFGLAECVNHLLKTSELKDRFGHSEKANELGIKIIEKMYNIVNSNVNEYCS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHC ATDGHFLLHAQVGIETDKGTSPGCRIPIGEEPNLPIHLLQSAKFHRYFPSGIGDIFPFES CCCCCEEEEEEECEECCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCC TAKKNPESILDIINGAFNEGMRYFSLYASDSDVIRITGYLVKLSDIKKLDKGEQVLQDTV CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEEEHHHHHHHCHHHHHHHHHH ALGLGAVKNSRILERKVRDDA HHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure MRVLDNTLNIIKNKTLTYEQKVLSLAREAENSLDVLNLPSDVQSLRDEGVICDLNEGNAP CCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCEEEECCCCCCC YRPRYICPDYEKFMKQGSEFLNLNPPKDIWEATNNLLILYKHVPSITSMPVYIGNIDTLL CCCCCCCCCHHHHHHCCCCEECCCCCHHHHHCCCCEEEEEECCCCCCCCCEEECCHHHHH DPFISDENEAYNAIKLFLLHIDRTITDSFCHANIGPKETKAGRLILKAQRELQTAIPNIT HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCE LKYGKETSKEFAIDSINTALITAKPSFANHEIFSKDFPYNNYGIASCYNGLYIGGGSFTL EECCCCCCHHHHHHCCCEEEEEECCCCCCCCHHCCCCCCCCCCHHHHCCCEEEECCCEEE VRLNLYGAAKKASSIEDFLDNVLPNVMTKMSNYIDKRINFIVNESNFFESSFLVREKLIH EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH KDRFTAMFGMFGLAECVNHLLKTSELKDRFGHSEKANELGIKIIEKMYNIVNSNVNEYCS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHC ATDGHFLLHAQVGIETDKGTSPGCRIPIGEEPNLPIHLLQSAKFHRYFPSGIGDIFPFES CCCCCEEEEEEECEECCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCCCC TAKKNPESILDIINGAFNEGMRYFSLYASDSDVIRITGYLVKLSDIKKLDKGEQVLQDTV CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEEEHHHHHHHCHHHHHHHHHH ALGLGAVKNSRILERKVRDDA HHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]