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The map label for this gene is dga

Identifier: 148381502

GI number: 148381502

Start: 3807386

End: 3808159

Strand: Reverse

Name: dga

Synonym: CBO3562

Alternate gene names: 148381502

Gene position: 3808159-3807386 (Counterclockwise)

Preceding gene: 148381504

Following gene: 148381501

Centisome position: 97.97

GC content: 30.49

Gene sequence:

>774_bases
TTGAGTATAAATGATAAGCCTATAGGTTTTTTTGATTCTGGAGTAGGCGGAATAAGTGTGTTAAAGGAAGCATTTAAGTT
ATTACCAAAGGAGGATTTTTTGTATTATGGAGATTCAAAAAATGCACCCTATGGAACTAAAAAAGTAGAAGAAGTTAAGG
CGTTAACCTTTAATGCAACAGACTTTTTGATGAGTAAGGGAATAAAAGCTTTAGTAGTGGCTTGTAATACAGCTACTAGC
GTAACTATAAATGACTTAAGGGAAAATTATGATATCCCTATTATAGGCATTGAACCTGCTTTAAAACCTGCGGTGGAATT
AAAGAAAGGTGGAAAGATAATAATAATGGCAACGCCTATGACCTTAGCTGAAAAGAAATTTGCTAATTTAATGGATTTGT
ATAAAGAAACAGAGGATATAGAGCCTTTGCCTTGTCCTGGGCTACCAGAACTAATAGAACAGGGAATAGTTTCTGGAGAT
GTAATTTATAATTATTTGAAGGATAAATTTTCAAAATATGACAATGAAAAAATATCATCTATTGTTCTAGGATGCACTCA
TTATCCTTTTATAGAAGAGACTTTAAAAGAGGTTACCCATAATAAAGCTTGTATAATAGATGGTAGTTTTGGTACATCTA
GAGAATTAAAAAGACAATTAAAAAATAGTAATATGCTAACAGAAGAAAATAGAGTGGGAAAAGTTACTATATTTAATTCA
AGAGAGGATAAGGATATAATAGATCTAAGCTATAAACTTTTTAATATGAAATAA

Upstream 100 bases:

>100_bases
TATATGTCAATAGAAATTTTATTCATACATTTATATAATATATATTATTGATAATATATTATAGAGTGAGAAATGATATT
TATATGATGAGGTGATAAAA

Downstream 100 bases:

>100_bases
AATATTTAAGAATAAGTTTATTTTCATAATTATAATTTTTAGTATACATAAAAAACAGAGTATAATAAAGATATTAAAAT
ATGATATAATTTATGCTAAT

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSINDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALTFNATDFLMSKGIKALVVACNTATS
VTINDLRENYDIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGIVSGD
VIYNYLKDKFSKYDNEKISSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLTEENRVGKVTIFNS
REDKDIIDLSYKLFNMK

Sequences:

>Translated_257_residues
MSINDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALTFNATDFLMSKGIKALVVACNTATS
VTINDLRENYDIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGIVSGD
VIYNYLKDKFSKYDNEKISSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLTEENRVGKVTIFNS
REDKDIIDLSYKLFNMK
>Mature_256_residues
SINDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALTFNATDFLMSKGIKALVVACNTATSV
TINDLRENYDIPIIGIEPALKPAVELKKGGKIIIMATPMTLAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGIVSGDV
IYNYLKDKFSKYDNEKISSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLTEENRVGKVTIFNSR
EDKDIIDLSYKLFNMK

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family

Homologues:

Organism=Escherichia coli, GI87082355, Length=218, Percent_Identity=33.4862385321101, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MURI_CLOB1 (A7FZC4)

Other databases:

- EMBL:   CP000726
- RefSeq:   YP_001385877.1
- ProteinModelPortal:   A7FZC4
- SMR:   A7FZC4
- STRING:   A7FZC4
- GeneID:   5395263
- GenomeReviews:   CP000726_GR
- KEGG:   cba:CLB_3644
- eggNOG:   COG0796
- HOGENOM:   HBG645102
- OMA:   ARTNAMI
- ProtClustDB:   PRK00865
- BioCyc:   CBOT441770:CLB_3644-MONOMER
- HAMAP:   MF_00258
- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391
- Gene3D:   G3DSA:3.40.50.1860
- TIGRFAMs:   TIGR00067

Pfam domain/function: PF01177 Asp_Glu_race; SSF53681 Asp/Glu_race

EC number: =5.1.1.3

Molecular weight: Translated: 28742; Mature: 28610

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00923 ASP_GLU_RACEMASE_1; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALTFNAT
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHEEECHH
DFLMSKGIKALVVACNTATSVTINDLRENYDIPIIGIEPALKPAVELKKGGKIIIMATPM
HHHHHCCCEEEEEEECCCCEEEHHHHHHCCCCEEEECCCCCCHHHHHCCCCEEEEEECCH
TLAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGIVSGDVIYNYLKDKFSKYDNEKISS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHH
IVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLTEENRVGKVTIFNS
HHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECC
REDKDIIDLSYKLFNMK
CCCCCHHHHHHEEECCC
>Mature Secondary Structure 
SINDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALTFNAT
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHEEECHH
DFLMSKGIKALVVACNTATSVTINDLRENYDIPIIGIEPALKPAVELKKGGKIIIMATPM
HHHHHCCCEEEEEEECCCCEEEHHHHHHCCCCEEEECCCCCCHHHHHCCCCEEEEEECCH
TLAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGIVSGDVIYNYLKDKFSKYDNEKISS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHH
IVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLTEENRVGKVTIFNS
HHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECC
REDKDIIDLSYKLFNMK
CCCCCHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA