| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148381268
Identifier: 148381268
GI number: 148381268
Start: 3543466
End: 3544623
Strand: Reverse
Name: 148381268
Synonym: CBO3325
Alternate gene names: NA
Gene position: 3544623-3543466 (Counterclockwise)
Preceding gene: 148381269
Following gene: 148381267
Centisome position: 91.19
GC content: 25.65
Gene sequence:
>1158_bases ATGGATGAAAAAAAATTGGCTAATTTAATTAAAAAAAATGAAGGGCTAAAATTAGATTTTAAACAGATGATAGATATTAA TACGGAGAGTGGTAAAAAAGAGTTAGCGAAGGATGTTTCTGCTATTGCCAATTCTAAGGGTGGTAGGGGATATATTATTA TAGGCATAGAGGATAAAATAAAAAACATAGTTGGTATAGATAATATGGATTTTACAGAGGAACAGATTCAACAGATTATA AGTTCAAGAATAGATCCTCCTGTACCAGTATCTTTAGAAGTCTTACAATATCATGGGAAAAAATTAGCTATTATTAATAT ATATGATAGCGATCAAAAACCATATCAAACAAGAGAAAATGGAGTCTTTTATATAAGAAGAGGATCAACTACAGATACTA TGAGAAAAGAGGAGATTATATCTTCCCTTCAGGATAGCTTAAGTTTAAATATTGAGTTATGTTCTATAGTTAAAAGTGAT GAAAAAGATATGGATATATCTTTAGTAGATAAGTATTTTAATGCTATAGGTGTGTTGGTTAATAATGATAATAGAATAGA TATGATGGAAAAGGCATCTATAATACATTATGATAAGGAAAGAGGTAAATTTATAGGTTCTTTAGGGGGATTACTTATAT TTTCTAAAAAAAATAATATATTTTTGTCCCATAATAGAGTAAAAATAATTAATAATATAAACAAAAAATTTAATAGAGTT AATATAATTCAAGGTGATTTATTATATATTATAGATAAGTCTAGAGATATCTTGGTAAATATTTTACCAAGATCATATCC TATAGACGCCGTATGTGAGGCTATAAATAATGCAGTACTATATAGGGATTATTCTATATTTTATGAAGAAATTGAAGTTT TAATAGATTATAAAAGTATTAGTATAATAAGTCCTGGGTGCCTTTTAAGAGATAATAATATGAGTTCTTTTAATGCACTA AAAAGGAATATGTGGATATATGAAAAGTTAATATCTTTAGACGATAAAAATAGATTTACTAAATCTGGTAATGGATTTAG AAGGATGAAAAAAGCCTTTAGGGGAAAAGGTAAGGTTATTTTTATAAATTCCTTTAAAGAAAATTGTTTTAAAGTTATGT TTCCTGGAATAAATAAATTTTATAAGAAAAATAGATAA
Upstream 100 bases:
>100_bases ACTCTGTAAATATTAAATTAAATGAATTAGAATATAATATATAAATAGGCTTTAATGTATATAATGTATTATCAGCTATA AGTATTTTAGGAGTAATGTT
Downstream 100 bases:
>100_bases AAAATATTATAAAATGTAATATTTTAGACTATTTTTTATTTTTAAAATATTCCTAATATTATTGAAAAACATTTTTAATT ACTATATAATTTAAATTAAG
Product: putative ATP-binding protein
Products: NA
Alternate protein names: Divergent AAA Domain Family; Divergent AAA Domain Protein; AAA Domain-Contain Protein; ATPase Central Domain-Containing Protein
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MDEKKLANLIKKNEGLKLDFKQMIDINTESGKKELAKDVSAIANSKGGRGYIIIGIEDKIKNIVGIDNMDFTEEQIQQII SSRIDPPVPVSLEVLQYHGKKLAIINIYDSDQKPYQTRENGVFYIRRGSTTDTMRKEEIISSLQDSLSLNIELCSIVKSD EKDMDISLVDKYFNAIGVLVNNDNRIDMMEKASIIHYDKERGKFIGSLGGLLIFSKKNNIFLSHNRVKIINNINKKFNRV NIIQGDLLYIIDKSRDILVNILPRSYPIDAVCEAINNAVLYRDYSIFYEEIEVLIDYKSISIISPGCLLRDNNMSSFNAL KRNMWIYEKLISLDDKNRFTKSGNGFRRMKKAFRGKGKVIFINSFKENCFKVMFPGINKFYKKNR
Sequences:
>Translated_385_residues MDEKKLANLIKKNEGLKLDFKQMIDINTESGKKELAKDVSAIANSKGGRGYIIIGIEDKIKNIVGIDNMDFTEEQIQQII SSRIDPPVPVSLEVLQYHGKKLAIINIYDSDQKPYQTRENGVFYIRRGSTTDTMRKEEIISSLQDSLSLNIELCSIVKSD EKDMDISLVDKYFNAIGVLVNNDNRIDMMEKASIIHYDKERGKFIGSLGGLLIFSKKNNIFLSHNRVKIINNINKKFNRV NIIQGDLLYIIDKSRDILVNILPRSYPIDAVCEAINNAVLYRDYSIFYEEIEVLIDYKSISIISPGCLLRDNNMSSFNAL KRNMWIYEKLISLDDKNRFTKSGNGFRRMKKAFRGKGKVIFINSFKENCFKVMFPGINKFYKKNR >Mature_385_residues MDEKKLANLIKKNEGLKLDFKQMIDINTESGKKELAKDVSAIANSKGGRGYIIIGIEDKIKNIVGIDNMDFTEEQIQQII SSRIDPPVPVSLEVLQYHGKKLAIINIYDSDQKPYQTRENGVFYIRRGSTTDTMRKEEIISSLQDSLSLNIELCSIVKSD EKDMDISLVDKYFNAIGVLVNNDNRIDMMEKASIIHYDKERGKFIGSLGGLLIFSKKNNIFLSHNRVKIINNINKKFNRV NIIQGDLLYIIDKSRDILVNILPRSYPIDAVCEAINNAVLYRDYSIFYEEIEVLIDYKSISIISPGCLLRDNNMSSFNAL KRNMWIYEKLISLDDKNRFTKSGNGFRRMKKAFRGKGKVIFINSFKENCFKVMFPGINKFYKKNR
Specific function: Unknown
COG id: COG2865
COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44311; Mature: 44311
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEKKLANLIKKNEGLKLDFKQMIDINTESGKKELAKDVSAIANSKGGRGYIIIGIEDKI CCHHHHHHHHHCCCCCEEEHHHHEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEHHHH KNIVGIDNMDFTEEQIQQIISSRIDPPVPVSLEVLQYHGKKLAIINIYDSDQKPYQTREN HHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCCCC GVFYIRRGSTTDTMRKEEIISSLQDSLSLNIELCSIVKSDEKDMDISLVDKYFNAIGVLV CEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCHHHHHHHHHHEEEEE NNDNRIDMMEKASIIHYDKERGKFIGSLGGLLIFSKKNNIFLSHNRVKIINNINKKFNRV CCCCCEEHHHHHHHEEEEHHHHHHHHCCCCEEEEEECCCEEEECCCEEEEHHHHHHHCEE NIIQGDLLYIIDKSRDILVNILPRSYPIDAVCEAINNAVLYRDYSIFYEEIEVLIDYKSI EEEECCEEEEEECCCCEEEEECCCCCCHHHHHHHHCCEEEEEHHHHHHHHHHHHEEECCE SIISPGCLLRDNNMSSFNALKRNMWIYEKLISLDDKNRFTKSGNGFRRMKKAFRGKGKVI EEECCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEE FINSFKENCFKVMFPGINKFYKKNR EEECCCCCHHEEECCCHHHHHHCCC >Mature Secondary Structure MDEKKLANLIKKNEGLKLDFKQMIDINTESGKKELAKDVSAIANSKGGRGYIIIGIEDKI CCHHHHHHHHHCCCCCEEEHHHHEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEHHHH KNIVGIDNMDFTEEQIQQIISSRIDPPVPVSLEVLQYHGKKLAIINIYDSDQKPYQTREN HHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCCCC GVFYIRRGSTTDTMRKEEIISSLQDSLSLNIELCSIVKSDEKDMDISLVDKYFNAIGVLV CEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCHHHHHHHHHHEEEEE NNDNRIDMMEKASIIHYDKERGKFIGSLGGLLIFSKKNNIFLSHNRVKIINNINKKFNRV CCCCCEEHHHHHHHEEEEHHHHHHHHCCCCEEEEEECCCEEEECCCEEEEHHHHHHHCEE NIIQGDLLYIIDKSRDILVNILPRSYPIDAVCEAINNAVLYRDYSIFYEEIEVLIDYKSI EEEECCEEEEEECCCCEEEEECCCCCCHHHHHHHHCCEEEEEHHHHHHHHHHHHEEECCE SIISPGCLLRDNNMSSFNALKRNMWIYEKLISLDDKNRFTKSGNGFRRMKKAFRGKGKVI EEECCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEE FINSFKENCFKVMFPGINKFYKKNR EEECCCCCHHEEECCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA