| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148381257
Identifier: 148381257
GI number: 148381257
Start: 3533026
End: 3533649
Strand: Direct
Name: 148381257
Synonym: CBO3314
Alternate gene names: NA
Gene position: 3533026-3533649 (Clockwise)
Preceding gene: 148381253
Following gene: 148381262
Centisome position: 90.9
GC content: 25.0
Gene sequence:
>624_bases ATGAAAAATTACGCTAAAGTAATAGTTGAAGGATCACCTATATCTAAATCTAATTTTAAGTTATTTAATTTGCAAGGACG AGCTATAATGCCCTTAAATTCAGGCAAATATCACGATAGATATGCAGTATATGAAGAAAAAATAGCTTATGAGGCAAGAC TTCAAAATCCTAACACAGTATTGGGAGAATCATTAATTGCAGTATTAAAAGTCTATTATAAAAGCGAAAAAAGACATCCT GATACAAATAATATAACTAAAAGCATATTTGATGGAATAGAAAAAAGCGGTATTATAATAAATGATGCTCAGATAAGAAG ATTAATAATCGAAGAATTTTATGATAAAGAATTTCCACGGTTTGAATTAGAATTATTTGCAGAAAGTATTTTTAAAATGG ACTATACTATTATAAAGAAAGAAAATACAGATAAGCCAATAAATTATTCTCCGCCTCCAAATAAAAAGGTTAAATTTAAT AAAAATAAAGATAAATCTATGTTAGTAGCAAAAGATAAAATGGTATGTGAAATATGTGGTAAATCTATAAATAAAAATGA TATTGTAACAGCAAATAAACAAACGGTAATAATATGTAAAAAATGTCTAACAAAATTATTTTAA
Upstream 100 bases:
>100_bases AATTAATAAGTTACAGTTCAAATAAAATCCAATTTATTAAGTCTAAATTTTTAATCGAATATGATATAATGAAATACAGA ATAGTAAAAGGAGCTTAAAT
Downstream 100 bases:
>100_bases CAGGCTATGTAGTCAGATTTGTCTAAAAACAGATTCCTTTATATAATCCTATTAAGAAAATATAAATTTTAATACGCTAC ATAAAAAGAGGCTATCTCAA
Product: endodeoxyribonuclease RusA family protein
Products: NA
Alternate protein names: Endodeoxyribonuclease RusA Family Protein; Endodeoxyribonuclease; Endonuclease; Zn-Finger Containing Protein; Crossover Junction Endodeoxyribonuclease RusA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKNYAKVIVEGSPISKSNFKLFNLQGRAIMPLNSGKYHDRYAVYEEKIAYEARLQNPNTVLGESLIAVLKVYYKSEKRHP DTNNITKSIFDGIEKSGIIINDAQIRRLIIEEFYDKEFPRFELELFAESIFKMDYTIIKKENTDKPINYSPPPNKKVKFN KNKDKSMLVAKDKMVCEICGKSINKNDIVTANKQTVIICKKCLTKLF
Sequences:
>Translated_207_residues MKNYAKVIVEGSPISKSNFKLFNLQGRAIMPLNSGKYHDRYAVYEEKIAYEARLQNPNTVLGESLIAVLKVYYKSEKRHP DTNNITKSIFDGIEKSGIIINDAQIRRLIIEEFYDKEFPRFELELFAESIFKMDYTIIKKENTDKPINYSPPPNKKVKFN KNKDKSMLVAKDKMVCEICGKSINKNDIVTANKQTVIICKKCLTKLF >Mature_207_residues MKNYAKVIVEGSPISKSNFKLFNLQGRAIMPLNSGKYHDRYAVYEEKIAYEARLQNPNTVLGESLIAVLKVYYKSEKRHP DTNNITKSIFDGIEKSGIIINDAQIRRLIIEEFYDKEFPRFELELFAESIFKMDYTIIKKENTDKPINYSPPPNKKVKFN KNKDKSMLVAKDKMVCEICGKSINKNDIVTANKQTVIICKKCLTKLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23945; Mature: 23945
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNYAKVIVEGSPISKSNFKLFNLQGRAIMPLNSGKYHDRYAVYEEKIAYEARLQNPNTV CCCCEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHH LGESLIAVLKVYYKSEKRHPDTNNITKSIFDGIEKSGIIINDAQIRRLIIEEFYDKEFPR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCC FELELFAESIFKMDYTIIKKENTDKPINYSPPPNKKVKFNKNKDKSMLVAKDKMVCEICG HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHC KSINKNDIVTANKQTVIICKKCLTKLF CCCCCCCEEECCCCEEEEHHHHHHHCC >Mature Secondary Structure MKNYAKVIVEGSPISKSNFKLFNLQGRAIMPLNSGKYHDRYAVYEEKIAYEARLQNPNTV CCCCEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHH LGESLIAVLKVYYKSEKRHPDTNNITKSIFDGIEKSGIIINDAQIRRLIIEEFYDKEFPR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCC FELELFAESIFKMDYTIIKKENTDKPINYSPPPNKKVKFNKNKDKSMLVAKDKMVCEICG HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHC KSINKNDIVTANKQTVIICKKCLTKLF CCCCCCCEEECCCCEEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA