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The map label for this gene is gatC

Identifier: 148381212

GI number: 148381212

Start: 3472191

End: 3472478

Strand: Reverse

Name: gatC

Synonym: CBO3267

Alternate gene names: 148381212

Gene position: 3472478-3472191 (Counterclockwise)

Preceding gene: 148381213

Following gene: 148381211

Centisome position: 89.34

GC content: 25.69

Gene sequence:

>288_bases
ATGTCAGTTTCAAAAAAAGATGTAGAATATGTAGCAGAACTTGCAAGGTTAGAATTTAAAGAGGAAGAAAAAGATAGTTT
TGTAAATGACTTAAACAAAATATTAAACTATATGGAAAAATTGGATGAATTAAATACCGATGATGTGGATATAGTAGTAA
ACCCATATTATATTGAAAACAAATATAGAGAAGATAATGTAGAAAAGTCTATGGAATTAAAAGAAGTTATAGATAATGCA
CCAGAAAGCTTAGAAGAATATGTAATTGTTCCTAAAGTTATAGATTAA

Upstream 100 bases:

>100_bases
TTTTTTATTTCTATGTAAAAAATATATATTTGTGGTAAAATAAAAATATTAGCCTTCATAAGGTAAAAAATAATGTTTAT
ATAAGGAAGTGAGGGATAAA

Downstream 100 bases:

>100_bases
TAATTCTTTTGTTTTCTGGAAAAGGGAGGAAAGAAAATGGATTTAACTAAATTAACAGCACACGAATTAAAAGATATGCT
TTCAAATAAAGAAGTTAAAG

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSVSKKDVEYVAELARLEFKEEEKDSFVNDLNKILNYMEKLDELNTDDVDIVVNPYYIENKYREDNVEKSMELKEVIDNA
PESLEEYVIVPKVID

Sequences:

>Translated_95_residues
MSVSKKDVEYVAELARLEFKEEEKDSFVNDLNKILNYMEKLDELNTDDVDIVVNPYYIENKYREDNVEKSMELKEVIDNA
PESLEEYVIVPKVID
>Mature_94_residues
SVSKKDVEYVAELARLEFKEEEKDSFVNDLNKILNYMEKLDELNTDDVDIVVNPYYIENKYREDNVEKSMELKEVIDNAP
ESLEEYVIVPKVID

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_CLOB1 (A7FYL4)

Other databases:

- EMBL:   CP000726
- RefSeq:   YP_001385587.1
- ProteinModelPortal:   A7FYL4
- SMR:   A7FYL4
- STRING:   A7FYL4
- GeneID:   5396086
- GenomeReviews:   CP000726_GR
- KEGG:   cba:CLB_3324
- eggNOG:   COG0721
- HOGENOM:   HBG586403
- OMA:   AIEVINV
- ProtClustDB:   PRK00034
- BioCyc:   CBOT441770:CLB_3324-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11224; Mature: 11092

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSKKDVEYVAELARLEFKEEEKDSFVNDLNKILNYMEKLDELNTDDVDIVVNPYYIEN
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECC
KYREDNVEKSMELKEVIDNAPESLEEYVIVPKVID
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SVSKKDVEYVAELARLEFKEEEKDSFVNDLNKILNYMEKLDELNTDDVDIVVNPYYIEN
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECC
KYREDNVEKSMELKEVIDNAPESLEEYVIVPKVID
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA