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The map label for this gene is yjiM [H]

Identifier: 148381194

GI number: 148381194

Start: 3454464

End: 3455612

Strand: Reverse

Name: yjiM [H]

Synonym: CBO3245

Alternate gene names: 148381194

Gene position: 3455612-3454464 (Counterclockwise)

Preceding gene: 148381195

Following gene: 148381193

Centisome position: 88.9

GC content: 30.55

Gene sequence:

>1149_bases
ATGAATAAATTACCAGATTTTATTAAGGATTTTAGTGAAGCTAAAAGAAATGCATTTGTAAAAATGAAAGAAATTAAAGA
TGAAGGTGGAAAAATAGTGGGAGTTTATTGCGGATTTGCTCCCTGGGAAGTGATAGCTGCATCAGGAGCAGTGGGGGCTT
GGCTTTGTGGAATGGATGAGGAACCTATAGAGGATGCAGAAAAACATTTGCCAAGAAATTTATGCCCACTAATAAAATCA
AGTTATGGTTTTGCATTAACGGAAAAGTGCCCATTTTATTATTTTTCAGATATGCTTTTAGGAGAAACTACTTGTGATGG
AAAAAAGAAAATGTATGAAGCATTAAGTAAAATGAAACCTATGCATGTTATGAATATACCCCAAACTCCTTATGGAAAGG
ATTCTTATAATTATTACAAGAAAGCAATTATAAAGCTTAAAGAGGAATTAGAAAAGAATTTGAATGTAGAAATTACGGAA
GAAAAGCTAAAAGAAAAAATTAAATTAAGAAATAGAGAAAGAATGGCATTAAGAGATTATTATAGCTTATCTAAGCTTTG
TCCACCACCTATGACAGGTTATAATTTGAGGAGGGTAATACAGGGAACTTTATATTTATCAGATAAGGAAAAGGAAATAG
AGGATATAAATAATATAATAAGAGAAACAATGAAAAAATATAATGAAGGTGAAAGGCCTGTTTCTAAAGAGGCTAAAAGA
ATACTTGTAACAGGTTGTCCTCTAGGAGAGTCTACTGAAAAAGTAATTGAGGCTATAGAAGCTAATGGGGGAGTAGTAGT
TTGTTATGAAAATTGTAGTGGTGCAAAAGATGAAAGTTTATTAGTAGATGAAGAAAAAAATCCAATAGATGCATTAACAG
AAAGATATTTAAGAACAGCCTGTGCTTGTATGAGTCCTAATGATAATAGGATAGAATATTTAGATTATTTAATAGATGAA
TATAGGGTGGAGGGTGTAGTAGAAGTTATATTACAAGCATGCCATACCTATAATGTAGAATCTCATAGAATAAAAACTTT
TGTTACAAATAATAAAAAGGTATCTTATTTAAAAATAGAAACAGATTATTCTAAAAGGGATTTAGGCCAACTAAAAACTA
GAGTGGAGGCTTTTATAGAAATGTTATAA

Upstream 100 bases:

>100_bases
AATGGGTGTCTCAAAATGAAATAGATTTAATTTTAAAATCGCAAATATAAAATTAAGCCTATTTTGAGGCATCCCATTTT
TATCTAGAGGGGGATATTAT

Downstream 100 bases:

>100_bases
TATGAAAATTAAATTTGTATAAAAAAATATAATAAGTATAACTGTAACCATTACATATTCAAATAACTTGCTATATATTA
ACTATGGTAAAATTGATATG

Product: 2-hydroxyacyl-CoA dehydratase beta-subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MNKLPDFIKDFSEAKRNAFVKMKEIKDEGGKIVGVYCGFAPWEVIAASGAVGAWLCGMDEEPIEDAEKHLPRNLCPLIKS
SYGFALTEKCPFYYFSDMLLGETTCDGKKKMYEALSKMKPMHVMNIPQTPYGKDSYNYYKKAIIKLKEELEKNLNVEITE
EKLKEKIKLRNRERMALRDYYSLSKLCPPPMTGYNLRRVIQGTLYLSDKEKEIEDINNIIRETMKKYNEGERPVSKEAKR
ILVTGCPLGESTEKVIEAIEANGGVVVCYENCSGAKDESLLVDEEKNPIDALTERYLRTACACMSPNDNRIEYLDYLIDE
YRVEGVVEVILQACHTYNVESHRIKTFVTNNKKVSYLKIETDYSKRDLGQLKTRVEAFIEML

Sequences:

>Translated_382_residues
MNKLPDFIKDFSEAKRNAFVKMKEIKDEGGKIVGVYCGFAPWEVIAASGAVGAWLCGMDEEPIEDAEKHLPRNLCPLIKS
SYGFALTEKCPFYYFSDMLLGETTCDGKKKMYEALSKMKPMHVMNIPQTPYGKDSYNYYKKAIIKLKEELEKNLNVEITE
EKLKEKIKLRNRERMALRDYYSLSKLCPPPMTGYNLRRVIQGTLYLSDKEKEIEDINNIIRETMKKYNEGERPVSKEAKR
ILVTGCPLGESTEKVIEAIEANGGVVVCYENCSGAKDESLLVDEEKNPIDALTERYLRTACACMSPNDNRIEYLDYLIDE
YRVEGVVEVILQACHTYNVESHRIKTFVTNNKKVSYLKIETDYSKRDLGQLKTRVEAFIEML
>Mature_382_residues
MNKLPDFIKDFSEAKRNAFVKMKEIKDEGGKIVGVYCGFAPWEVIAASGAVGAWLCGMDEEPIEDAEKHLPRNLCPLIKS
SYGFALTEKCPFYYFSDMLLGETTCDGKKKMYEALSKMKPMHVMNIPQTPYGKDSYNYYKKAIIKLKEELEKNLNVEITE
EKLKEKIKLRNRERMALRDYYSLSKLCPPPMTGYNLRRVIQGTLYLSDKEKEIEDINNIIRETMKKYNEGERPVSKEAKR
ILVTGCPLGESTEKVIEAIEANGGVVVCYENCSGAKDESLLVDEEKNPIDALTERYLRTACACMSPNDNRIEYLDYLIDE
YRVEGVVEVILQACHTYNVESHRIKTFVTNNKKVSYLKIETDYSKRDLGQLKTRVEAFIEML

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0007 [H]

Homologues:

Organism=Escherichia coli, GI87082427, Length=382, Percent_Identity=47.9057591623037, Blast_Score=388, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 43884; Mature: 43884

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLPDFIKDFSEAKRNAFVKMKEIKDEGGKIVGVYCGFAPWEVIAASGAVGAWLCGMDE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCHHHEECCCCC
EPIEDAEKHLPRNLCPLIKSSYGFALTEKCPFYYFSDMLLGETTCDGKKKMYEALSKMKP
CCHHHHHHHCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
MHVMNIPQTPYGKDSYNYYKKAIIKLKEELEKNLNVEITEEKLKEKIKLRNRERMALRDY
CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCHHHHHHHHH
YSLSKLCPPPMTGYNLRRVIQGTLYLSDKEKEIEDINNIIRETMKKYNEGERPVSKEAKR
HHHHHCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCE
ILVTGCPLGESTEKVIEAIEANGGVVVCYENCSGAKDESLLVDEEKNPIDALTERYLRTA
EEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHH
CACMSPNDNRIEYLDYLIDEYRVEGVVEVILQACHTYNVESHRIKTFVTNNKKVSYLKIE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCEEEEEEEE
TDYSKRDLGQLKTRVEAFIEML
CCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKLPDFIKDFSEAKRNAFVKMKEIKDEGGKIVGVYCGFAPWEVIAASGAVGAWLCGMDE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCHHHEECCCCC
EPIEDAEKHLPRNLCPLIKSSYGFALTEKCPFYYFSDMLLGETTCDGKKKMYEALSKMKP
CCHHHHHHHCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
MHVMNIPQTPYGKDSYNYYKKAIIKLKEELEKNLNVEITEEKLKEKIKLRNRERMALRDY
CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCHHHHHHHHH
YSLSKLCPPPMTGYNLRRVIQGTLYLSDKEKEIEDINNIIRETMKKYNEGERPVSKEAKR
HHHHHCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCE
ILVTGCPLGESTEKVIEAIEANGGVVVCYENCSGAKDESLLVDEEKNPIDALTERYLRTA
EEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHH
CACMSPNDNRIEYLDYLIDEYRVEGVVEVILQACHTYNVESHRIKTFVTNNKKVSYLKIE
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCEEEEEEEE
TDYSKRDLGQLKTRVEAFIEML
CCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]