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The map label for this gene is tsr [C]

Identifier: 148381161

GI number: 148381161

Start: 3419836

End: 3421842

Strand: Reverse

Name: tsr [C]

Synonym: CBO3213

Alternate gene names: 148381161

Gene position: 3421842-3419836 (Counterclockwise)

Preceding gene: 148381162

Following gene: 148381159

Centisome position: 88.03

GC content: 28.3

Gene sequence:

>2007_bases
ATGAAAAGTATAAAGTCTAAGATAGTAACAATTATAGCTATAGTTTGTATAGTAAGTGTAGCTTTATGTTCTTCTATAAG
TTACTATTTTTCTTATAAAGCTATAATGGCAGAATCTACAAATAAGGTAAGTATGGCATCCCAAAAATATTCAGAAATGA
TAAATGGATGGCTTTTAACTAAAGCTAAATTAATGGATTCAATGGTGGTAGATTTTCAATATAATAATAAATATGATCAA
AAATATATATATAGCTATTTTCAAAGTCAATTAAAGGATAACAAAGACGTTATAGGCATGTATGTTGGATTTGAGGATAA
AAAATTTATATCCGGTAATGGATGGATACCAACTAAAGATTATGATTGTAGACAAAGAGATTGGTATAAAGAAGCTGTTA
AAAAAGATGGAATAATATATTCGGCCCCATATATAGATAAGAAATTTAATAGTATGGTAATAACTGTAGCTAAACCCATT
AGAAAAGATGGAAAGATAATAGGCGTTGTAGGTATGGATGTAGTTGTAGAATACCTTAAAACTCTAGTACAAAAAGCAAC
ACCAGTAAAAAATAGTTATGGTTTTTTATTAGATAGTAATAATGACTTTATTGTTCATCCTAATAAAGAATTTCAACCTA
AAGATGAAAAAGTGATTAATGTAAGCAAAATTATGAATGGAAAATTAAAAGATTTAGCACAGTTAGATTCTAGCAATAAT
AAAGTTTTAAAGTCAAAAGACTATGATAATAAAGAAAAAATATTTACAAGAAGTAAGATACTATCATCAAATTGGTCAGT
AGGATTTTCAGTACCTGTAGAAGAGTTTAAAAAACCTTTAAATAATATTATCATAGGCTTTCTATCAGTTATAGCAATAT
CCTTAGTGGCAGCAGTAATTTTTGCCCTATATGCAGGTAAAAAAATATCTGATCCTATTTTAAAGATAACAGAGTTAGTA
AATGAAACAAAAGATCTAGATTTAACTAGCAGGAACAACTATGAAACTATAGCTTTATATAAAGATGAAACAGGAATAAT
AGGTAGGGCAGTTATAGATTTAAGAGAAGAATTAAAAAATATTGTAGAAGAACTAAAAAAATCATCAAAGGATGTATTAA
AATATTCAGAAATAGTAAATGGAGCTACGGATGAAACCGTTCAATCCATAGAAGCAATATCAACAACAGTAGATGAACTA
GCAAAAGGATCTGTAGATCAGGCTAAAGATGCACAAAATGGGTCAGAAAAATTGTTTAGTTTAGCAGAAGAAATTAAAAT
AACACATAATAGTACGAATTTAGTCAAAACATATTCTTTAGAAACTAAAGAAAATAGTGAAAAAGGCATATTATCTATGG
AAGAAACTATAGATAAATTTAAAGAGAATAATAGGGTGAACAAAGAATTGGGTAAAAATGTAGAGATGTTATCTAATAAG
TCAGGATCTATAGGAGAAATAATAAATTCCATACAATCTATTGCGGAACAAACCAATCTATTAGCTTTAAATGCAGCTAT
AGAAGCGGCTAGAGCAGGGGAAGCAGGCAAAGGCTTTGCTGTTGTGGCTGAAGAAATAAGAAAATTAGCAGAACAAACAT
CTATTTCAACTAAAGAAATAGAAAATATAGTAAGGGAAATACAGTTTGAAATAGATAATACAAAAAATAATATGGATTTA
TCAGAGAAGGTCGTGGGAGAAGTAAATGATGCTATGAAAATATCAAAGAAATCCTTTGATATTATAACAAAATCTATAGT
AGATATAATAAATCAAATAGAAATTTTGGTAGAAAATGTTAATAAGGTAGATTCAGATAAGGAAGAGGTATTAACTGCAA
TACAAGGAATATCTGCTATAGCTGAAGAGTCAGCGGCTTCTACAGAAGAAGTATCAGCTTCCGTTGAAGAACAAACAGCA
TCTATGGAAAGTATTTCACAAACAGCTAAAGATTTAAAAGAAATAACAAGTACATTGGATGAATTAGTTAACAAATTCGA
AATTTAG

Upstream 100 bases:

>100_bases
AAATAAAGATAAAATTGTAATTTATGTATTAATTTTTGTAGAATTTAAACGATAACATAAATATTATTATTATTTTAACA
AAGTTGGGGGAGAAATATAT

Downstream 100 bases:

>100_bases
AAATAGAAGTAATTCAAATTTTAATAAAAAGGCCTTTTTTTAATCGGATTTTACATGAATTAGATTTATTAAAGAAAGGC
CTTTTTATCTAATTTTTACT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 668; Mature: 668

Protein sequence:

>668_residues
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLTKAKLMDSMVVDFQYNNKYDQ
KYIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKDYDCRQRDWYKEAVKKDGIIYSAPYIDKKFNSMVITVAKPI
RKDGKIIGVVGMDVVVEYLKTLVQKATPVKNSYGFLLDSNNDFIVHPNKEFQPKDEKVINVSKIMNGKLKDLAQLDSSNN
KVLKSKDYDNKEKIFTRSKILSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLVAAVIFALYAGKKISDPILKITELV
NETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKNIVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDEL
AKGSVDQAKDAQNGSEKLFSLAEEIKITHNSTNLVKTYSLETKENSEKGILSMEETIDKFKENNRVNKELGKNVEMLSNK
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEIENIVREIQFEIDNTKNNMDL
SEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEILVENVNKVDSDKEEVLTAIQGISAIAEESAASTEEVSASVEEQTA
SMESISQTAKDLKEITSTLDELVNKFEI

Sequences:

>Translated_668_residues
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLTKAKLMDSMVVDFQYNNKYDQ
KYIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKDYDCRQRDWYKEAVKKDGIIYSAPYIDKKFNSMVITVAKPI
RKDGKIIGVVGMDVVVEYLKTLVQKATPVKNSYGFLLDSNNDFIVHPNKEFQPKDEKVINVSKIMNGKLKDLAQLDSSNN
KVLKSKDYDNKEKIFTRSKILSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLVAAVIFALYAGKKISDPILKITELV
NETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKNIVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDEL
AKGSVDQAKDAQNGSEKLFSLAEEIKITHNSTNLVKTYSLETKENSEKGILSMEETIDKFKENNRVNKELGKNVEMLSNK
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEIENIVREIQFEIDNTKNNMDL
SEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEILVENVNKVDSDKEEVLTAIQGISAIAEESAASTEEVSASVEEQTA
SMESISQTAKDLKEITSTLDELVNKFEI
>Mature_668_residues
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLTKAKLMDSMVVDFQYNNKYDQ
KYIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKDYDCRQRDWYKEAVKKDGIIYSAPYIDKKFNSMVITVAKPI
RKDGKIIGVVGMDVVVEYLKTLVQKATPVKNSYGFLLDSNNDFIVHPNKEFQPKDEKVINVSKIMNGKLKDLAQLDSSNN
KVLKSKDYDNKEKIFTRSKILSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLVAAVIFALYAGKKISDPILKITELV
NETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKNIVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDEL
AKGSVDQAKDAQNGSEKLFSLAEEIKITHNSTNLVKTYSLETKENSEKGILSMEETIDKFKENNRVNKELGKNVEMLSNK
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEIENIVREIQFEIDNTKNNMDL
SEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEILVENVNKVDSDKEEVLTAIQGISAIAEESAASTEEVSASVEEQTA
SMESISQTAKDLKEITSTLDELVNKFEI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=273, Percent_Identity=27.4725274725275, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787690, Length=174, Percent_Identity=33.9080459770115, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788194, Length=394, Percent_Identity=24.1116751269036, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788195, Length=204, Percent_Identity=30.3921568627451, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1789453, Length=269, Percent_Identity=25.6505576208178, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 74544; Mature: 74544

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KAKLMDSMVVDFQYNNKYDQKYIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKD
HHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCC
YDCRQRDWYKEAVKKDGIIYSAPYIDKKFNSMVITVAKPIRKDGKIIGVVGMDVVVEYLK
CCCHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEHHHCCCCCEEEEHHHHHHHHHHH
TLVQKATPVKNSYGFLLDSNNDFIVHPNKEFQPKDEKVINVSKIMNGKLKDLAQLDSSNN
HHHHHCCCCCCCCCEEEECCCCEEECCCCCCCCCCHHHEEHHHHHCCHHHHHHHHCCCCC
KVLKSKDYDNKEKIFTRSKILSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLVAAVI
CEEECCCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALYAGKKISDPILKITELVNETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKN
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
IVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDELAKGSVDQAKDAQNGSEKLFS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH
LAEEIKITHNSTNLVKTYSLETKENSEKGILSMEETIDKFKENNRVNKELGKNVEMLSNK
HHHHHEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHCCC
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEI
CCCHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
ENIVREIQFEIDNTKNNMDLSEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEILVENV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKVDSDKEEVLTAIQGISAIAEESAASTEEVSASVEEQTASMESISQTAKDLKEITSTLD
HHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELVNKFEI
HHHHHHCC
>Mature Secondary Structure
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KAKLMDSMVVDFQYNNKYDQKYIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKD
HHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCC
YDCRQRDWYKEAVKKDGIIYSAPYIDKKFNSMVITVAKPIRKDGKIIGVVGMDVVVEYLK
CCCHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEHHHCCCCCEEEEHHHHHHHHHHH
TLVQKATPVKNSYGFLLDSNNDFIVHPNKEFQPKDEKVINVSKIMNGKLKDLAQLDSSNN
HHHHHCCCCCCCCCEEEECCCCEEECCCCCCCCCCHHHEEHHHHHCCHHHHHHHHCCCCC
KVLKSKDYDNKEKIFTRSKILSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLVAAVI
CEEECCCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALYAGKKISDPILKITELVNETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKN
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
IVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDELAKGSVDQAKDAQNGSEKLFS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH
LAEEIKITHNSTNLVKTYSLETKENSEKGILSMEETIDKFKENNRVNKELGKNVEMLSNK
HHHHHEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHCCC
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEI
CCCHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
ENIVREIQFEIDNTKNNMDLSEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEILVENV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKVDSDKEEVLTAIQGISAIAEESAASTEEVSASVEEQTASMESISQTAKDLKEITSTLD
HHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELVNKFEI
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA