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The map label for this gene is yebC [C]

Identifier: 148381024

GI number: 148381024

Start: 3260150

End: 3260890

Strand: Reverse

Name: yebC [C]

Synonym: CBO3073

Alternate gene names: 148381024

Gene position: 3260890-3260150 (Counterclockwise)

Preceding gene: 148381025

Following gene: 148381023

Centisome position: 83.89

GC content: 35.9

Gene sequence:

>741_bases
ATGTCAGGACATTCAAAATGGCATAACATACAAGCTAAAAAAGGCAAAGTGGATGCTAAAAGAGGAAAGATTTTTACTAA
AATAGGTAAAGAAATTGTGGTAGCAGTTAAGCAAGGAGGTCCAAGCGCGGACTCGAATCCAAGACTTAGAGACGTTATTG
CAAAAGCAAAGGCTAATAATATGCCAAATGATACAATAGAAAGATCTATAAAGAAGGCGTCAGGAGAACTTAATGCTGTA
GATTATGAAACTATTACATATGAAGGATATGGTCCAGCAGGTATAGCAGTTCTAGTTGATGTATTAACAGATAACAAAAA
TAGAAGTGCAGGAAATGTAAGATACGCCTTTACAAAACAAGGTGGAAACATGGGTTCAACAGGTTGTGTATCATTTATGT
TCCAATCTAAGGGGCAAATCGTTATAGAAAAGAAAGATGGCTTAGATGAAGATGAACTTATGATGATGGCATTAGATGCA
GGAGCAGAAGACTTTGAGTCAGAAGATGAGGTTTATGCTGTAACAACTTCTCAAGAGGATTTTGGAACAGTTAGAGAAGC
TCTAGAAGCAGAAGGATTAGAATTTTTAGAGGCAGAAATTAAGATGGTTCCAAATACATATACAGCAATAGATGAAGAAA
CAGCAACTAAATTTCAAAAGATGCTAGATGTCTTAGAAGATGACGATGATGTTCAAAATGTTTATCATAATGCGGAATTC
CCTGAAGGATGGGAAGAGTAA

Upstream 100 bases:

>100_bases
TTAAATATTAGTATTTTCAATTATAAATATACTAATAAAAATAGTTTTAAAAATAGAATTGATATAAATTTTTCTATTAA
TAAGGTTGGGAGGAAATAAC

Downstream 100 bases:

>100_bases
TAATGTAAGGAAAGTGCGATGCACTTTCCTTATTTAGATTACAGAGTATAATGAACAGAGAACAAATAAGGAAGATTTTA
CTCCACCCTGTTACGTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSGHSKWHNIQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANNMPNDTIERSIKKASGELNAV
DYETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQGGNMGSTGCVSFMFQSKGQIVIEKKDGLDEDELMMMALDA
GAEDFESEDEVYAVTTSQEDFGTVREALEAEGLEFLEAEIKMVPNTYTAIDEETATKFQKMLDVLEDDDDVQNVYHNAEF
PEGWEE

Sequences:

>Translated_246_residues
MSGHSKWHNIQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANNMPNDTIERSIKKASGELNAV
DYETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQGGNMGSTGCVSFMFQSKGQIVIEKKDGLDEDELMMMALDA
GAEDFESEDEVYAVTTSQEDFGTVREALEAEGLEFLEAEIKMVPNTYTAIDEETATKFQKMLDVLEDDDDVQNVYHNAEF
PEGWEE
>Mature_245_residues
SGHSKWHNIQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANNMPNDTIERSIKKASGELNAVD
YETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQGGNMGSTGCVSFMFQSKGQIVIEKKDGLDEDELMMMALDAG
AEDFESEDEVYAVTTSQEDFGTVREALEAEGLEFLEAEIKMVPNTYTAIDEETATKFQKMLDVLEDDDDVQNVYHNAEFP
EGWEE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=29.5546558704453, Blast_Score=128, Evalue=4e-30,
Organism=Escherichia coli, GI1788171, Length=243, Percent_Identity=49.7942386831276, Blast_Score=242, Evalue=2e-65,
Organism=Escherichia coli, GI1788294, Length=238, Percent_Identity=39.0756302521008, Blast_Score=150, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17556100, Length=243, Percent_Identity=28.3950617283951, Blast_Score=95, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6321458, Length=266, Percent_Identity=34.9624060150376, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 27093; Mature: 26962

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWHNIQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANN
CCCCCCCCCCCCCCCCCCHHHCHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
MPNDTIERSIKKASGELNAVDYETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQ
CCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEC
GGNMGSTGCVSFMFQSKGQIVIEKKDGLDEDELMMMALDAGAEDFESEDEVYAVTTSQED
CCCCCCHHHHHHHCCCCCCEEEECCCCCCHHHEEEEEECCCCCCCCCCCCEEEEECCCHH
FGTVREALEAEGLEFLEAEIKMVPNTYTAIDEETATKFQKMLDVLEDDDDVQNVYHNAEF
HHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PEGWEE
CCCCCC
>Mature Secondary Structure 
SGHSKWHNIQAKKGKVDAKRGKIFTKIGKEIVVAVKQGGPSADSNPRLRDVIAKAKANN
CCCCCCCCCCCCCCCCCHHHCHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
MPNDTIERSIKKASGELNAVDYETITYEGYGPAGIAVLVDVLTDNKNRSAGNVRYAFTKQ
CCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEC
GGNMGSTGCVSFMFQSKGQIVIEKKDGLDEDELMMMALDAGAEDFESEDEVYAVTTSQED
CCCCCCHHHHHHHCCCCCCEEEECCCCCCHHHEEEEEECCCCCCCCCCCCEEEEECCCHH
FGTVREALEAEGLEFLEAEIKMVPNTYTAIDEETATKFQKMLDVLEDDDDVQNVYHNAEF
HHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PEGWEE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA