| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380986
Identifier: 148380986
GI number: 148380986
Start: 3227661
End: 3228080
Strand: Reverse
Name: 148380986
Synonym: CBO3035
Alternate gene names: NA
Gene position: 3228080-3227661 (Counterclockwise)
Preceding gene: 148380987
Following gene: 148380985
Centisome position: 83.05
GC content: 28.81
Gene sequence:
>420_bases ATGTCTAAATTTAATTACAAGGTTCCAGGGGATTGCATACAGCAAGATATAATTAATAATGTTATACCAGAAACTTTATG GCAAAATGTATATTTATATTTAAAAAAATTAGGATATAATGTGTATGCTCCTGGACAAAAGAGAAACAAATGTACAGAAA GCTATGTAGTTATAAAGGAAAATGGTGTACATGCCTTAGTTGGAAATATATCTGGTTATAAACTATTTGATATTATAGTC TATAGCCCTATGGATCAATATTCCACTATAGAATTTTATGTAGAGAATATAAAAGAAGCTTTAAAAAAAATAGAAGATCT TAGGCCTACAGGGAATGAAACACCAAGCGTTATAGATTACGATGTACAAGCTTACACTACAAGCATAGAATATCAACAAT TTAAAAGTTTAAGGAGGTAA
Upstream 100 bases:
>100_bases TATGTAATGATAAAAAATATGCAATATTAAAACCAACTATAGATAAACTGAGTCCACAAATACTTAAGGGGATGAGTAAT TTATTTGGGAAGTGATGTAA
Downstream 100 bases:
>100_bases TTTAATGACAAGCGGAAAAACTTTAGTTAATGTTGTGAAAGTTAATTTTATTGATGAGGTAACAAATACAAAACATACAA TAGAAACAAGCAATGAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSKFNYKVPGDCIQQDIINNVIPETLWQNVYLYLKKLGYNVYAPGQKRNKCTESYVVIKENGVHALVGNISGYKLFDIIV YSPMDQYSTIEFYVENIKEALKKIEDLRPTGNETPSVIDYDVQAYTTSIEYQQFKSLRR
Sequences:
>Translated_139_residues MSKFNYKVPGDCIQQDIINNVIPETLWQNVYLYLKKLGYNVYAPGQKRNKCTESYVVIKENGVHALVGNISGYKLFDIIV YSPMDQYSTIEFYVENIKEALKKIEDLRPTGNETPSVIDYDVQAYTTSIEYQQFKSLRR >Mature_138_residues SKFNYKVPGDCIQQDIINNVIPETLWQNVYLYLKKLGYNVYAPGQKRNKCTESYVVIKENGVHALVGNISGYKLFDIIVY SPMDQYSTIEFYVENIKEALKKIEDLRPTGNETPSVIDYDVQAYTTSIEYQQFKSLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16167; Mature: 16035
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFNYKVPGDCIQQDIINNVIPETLWQNVYLYLKKLGYNVYAPGQKRNKCTESYVVIKE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEC NGVHALVGNISGYKLFDIIVYSPMDQYSTIEFYVENIKEALKKIEDLRPTGNETPSVIDY CCCEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE DVQAYTTSIEYQQFKSLRR CHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKFNYKVPGDCIQQDIINNVIPETLWQNVYLYLKKLGYNVYAPGQKRNKCTESYVVIKE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEC NGVHALVGNISGYKLFDIIVYSPMDQYSTIEFYVENIKEALKKIEDLRPTGNETPSVIDY CCCEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE DVQAYTTSIEYQQFKSLRR CHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA