| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380968
Identifier: 148380968
GI number: 148380968
Start: 3209469
End: 3210383
Strand: Reverse
Name: 148380968
Synonym: CBO3019
Alternate gene names: NA
Gene position: 3210383-3209469 (Counterclockwise)
Preceding gene: 148380969
Following gene: 148380967
Centisome position: 82.59
GC content: 24.04
Gene sequence:
>915_bases ATGGGAAATTTTAAACCAGCTTGGGATTTAGAATATGATTGTAGTGTATTACCTAGTGCGTCTGGTTGGCATAATGTTGT AGGTGGAAATATGATGAGTATCATAGATGAGATGCTTTACATTAATGATAATTCCATATCTTCTGGTTCATATTTCGAAA TGAAAAATGTAATTAATGATAGTAATATTGTAACTCTTGAATGTACTATAAAAGTTATGGGTTCTAATAAACATTTTTCT GTACAAATGCAAATAAATGATAACAAAATGGGAATGTTGATAGGATTAGAACCTAGCAAACTTACTATAATTGATGCAAA TCTTTCAATTATAAAATCTATAGATATTGATTTAACTGATTTTAATATAATAAAAATTATTAAATATGGTCAATCTAAAT TTGAATTGTATATAAATAATAAATTTATTTATGAAAATAGTTTAAATGACAATGGTAAAAATTATAATGGACTAATTATA GGTGCTGGTTCCACTGCATTTTTAGGTGAGTTATATATAAAAAATGTAAGATATTGTTTAGATGGAATACCAATTTATTA TTCAGGTTCTTATTTAATTAATCAAAATGAAAATTATTATTCTACTAATTCTAATTTCCTTAATCTTGGACAACTTACAG ATAATACTCGATTAGAAAATTGGTACAATAAATATGGTGCAGATGATGTAAATATAATAACCCAAAATTTAAATAATAAA GAATTCCCTATGTCTAAAGATGAAAGTGGAATATGGAAAACTGATTTTCAATTAGACATGAATGAAGTTATAGATAGTAT TGAATTAATTGATACAGATGAGAATAATAAATCCATCAAATACAATTGTAATGATTATAGAATACTAGATTTATGTGATG ATCAATTTAAGTTAACAATGTGTAAAAGTAAATAA
Upstream 100 bases:
>100_bases AAATTTGAAGTGTTAATGAAGGAATGATGATAAGAATAATATAAAATATTCATTTTAAATATAATAATTTTTGAAATTTA ATAAAGAAAGAGATGATTTT
Downstream 100 bases:
>100_bases AGATAAATTAGATGACCATAATAATAGGTCTTTTTTTATTGTAGAAAATTAGAGCATAGATATTATTTCTATTGCTCTAA TTTTTTTGCAATACAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MGNFKPAWDLEYDCSVLPSASGWHNVVGGNMMSIIDEMLYINDNSISSGSYFEMKNVINDSNIVTLECTIKVMGSNKHFS VQMQINDNKMGMLIGLEPSKLTIIDANLSIIKSIDIDLTDFNIIKIIKYGQSKFELYINNKFIYENSLNDNGKNYNGLII GAGSTAFLGELYIKNVRYCLDGIPIYYSGSYLINQNENYYSTNSNFLNLGQLTDNTRLENWYNKYGADDVNIITQNLNNK EFPMSKDESGIWKTDFQLDMNEVIDSIELIDTDENNKSIKYNCNDYRILDLCDDQFKLTMCKSK
Sequences:
>Translated_304_residues MGNFKPAWDLEYDCSVLPSASGWHNVVGGNMMSIIDEMLYINDNSISSGSYFEMKNVINDSNIVTLECTIKVMGSNKHFS VQMQINDNKMGMLIGLEPSKLTIIDANLSIIKSIDIDLTDFNIIKIIKYGQSKFELYINNKFIYENSLNDNGKNYNGLII GAGSTAFLGELYIKNVRYCLDGIPIYYSGSYLINQNENYYSTNSNFLNLGQLTDNTRLENWYNKYGADDVNIITQNLNNK EFPMSKDESGIWKTDFQLDMNEVIDSIELIDTDENNKSIKYNCNDYRILDLCDDQFKLTMCKSK >Mature_303_residues GNFKPAWDLEYDCSVLPSASGWHNVVGGNMMSIIDEMLYINDNSISSGSYFEMKNVINDSNIVTLECTIKVMGSNKHFSV QMQINDNKMGMLIGLEPSKLTIIDANLSIIKSIDIDLTDFNIIKIIKYGQSKFELYINNKFIYENSLNDNGKNYNGLIIG AGSTAFLGELYIKNVRYCLDGIPIYYSGSYLINQNENYYSTNSNFLNLGQLTDNTRLENWYNKYGADDVNIITQNLNNKE FPMSKDESGIWKTDFQLDMNEVIDSIELIDTDENNKSIKYNCNDYRILDLCDDQFKLTMCKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34732; Mature: 34600
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNFKPAWDLEYDCSVLPSASGWHNVVGGNMMSIIDEMLYINDNSISSGSYFEMKNVIND CCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEHHHCCC SNIVTLECTIKVMGSNKHFSVQMQINDNKMGMLIGLEPSKLTIIDANLSIIKSIDIDLTD CCEEEEEEEEEEEECCCEEEEEEEECCCCEEEEEEECCCEEEEEECCEEEEEEEECEECC FNIIKIIKYGQSKFELYINNKFIYENSLNDNGKNYNGLIIGAGSTAFLGELYIKNVRYCL CEEEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH DGIPIYYSGSYLINQNENYYSTNSNFLNLGQLTDNTRLENWYNKYGADDVNIITQNLNNK CCEEEEEECEEEEECCCCEEECCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCC EFPMSKDESGIWKTDFQLDMNEVIDSIELIDTDENNKSIKYNCNDYRILDLCDDQFKLTM CCCCCCCCCCCEEEEEEECHHHHHCEEEEEECCCCCCEEEEECCCEEEEEECCCCEEEEE CKSK ECCC >Mature Secondary Structure GNFKPAWDLEYDCSVLPSASGWHNVVGGNMMSIIDEMLYINDNSISSGSYFEMKNVIND CCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEHHHCCC SNIVTLECTIKVMGSNKHFSVQMQINDNKMGMLIGLEPSKLTIIDANLSIIKSIDIDLTD CCEEEEEEEEEEEECCCEEEEEEEECCCCEEEEEEECCCEEEEEECCEEEEEEEECEECC FNIIKIIKYGQSKFELYINNKFIYENSLNDNGKNYNGLIIGAGSTAFLGELYIKNVRYCL CEEEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH DGIPIYYSGSYLINQNENYYSTNSNFLNLGQLTDNTRLENWYNKYGADDVNIITQNLNNK CCEEEEEECEEEEECCCCEEECCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCC EFPMSKDESGIWKTDFQLDMNEVIDSIELIDTDENNKSIKYNCNDYRILDLCDDQFKLTM CCCCCCCCCCCEEEEEEECHHHHHCEEEEEECCCCCCEEEEECCCEEEEEECCCCEEEEE CKSK ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA