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The map label for this gene is 148380943

Identifier: 148380943

GI number: 148380943

Start: 3185186

End: 3187039

Strand: Reverse

Name: 148380943

Synonym: CBO2992

Alternate gene names: NA

Gene position: 3187039-3185186 (Counterclockwise)

Preceding gene: 148380944

Following gene: 148380942

Centisome position: 81.99

GC content: 30.8

Gene sequence:

>1854_bases
TTGATGAACAGAATATCAGATGATGTACTATTCAGAGTAGAAAAACCTGCCAGATATATAGGAGGAGAATTAAACTCTTA
TAATAAAGATTTAAATGATATAGACATAAGATATGCATTTTGTTTTCCAGATGTTTATGAAGTTGGAATGTCTCATTTAG
GTATGAAAATACTTTATTACATATTAAATGAAAGAAAAGATATTTTCTGTGAAAGAGTTTTTGCACCTTGGCCAGATATG
GAGAAAATAATGAGGGAAGAAAATATTCCGCTATATGGTTTGGAAAGCAAAGATCCCATAAAGGATTTTGATTTTATAGG
ATTTACTCTGCAATATGAAATGAGTTACACTAATATATTAAATATGTTAGATCTAGCTGGAGTTACTATAAGGGCTTCGG
AAAGAAGGGAAGAGGAACCTATAGTAATGTGCGGAGGACCTTGTGCATATAACCCAGAACCACTTTATAACATAGCAGAT
ATGTTTGTTCTAGGGGAAGGGGAAGAATTAAATACTAAGATATTAGATTTATATAAAAAATATAAAGGCAAAGGAAATAA
AAGGGAATTTTTAAGAGAAGCATCTAAAATAAGAGGAGTGTATATACCTTCTCTTTATGAGGTTACTTATAAAAAAGATA
ATACTATAAAAGAATTTAAACCTCTATATGATGATGTGCCTAAAAAAGTAAAAAAAGTTATTATTAATAATATAAACGAT
GTAGTTTATCCAGATAAGTTTGTTGTTCCTTATACTGATATAGTTCATGATAGAATAGTTTTAGAAACTTTTAGAGGATG
TACAAGAGGCTGTAGATTTTGTCAAGCTGGAATGATATATAGACCTGTAAGAGAAAAGAAAACAGAAAGGTTATTAGAAT
TATCTGATAAATTAATAAAAAATACAGGATATGATGAAGTAACACTATCTTCTTTAAGTATATGTGATTATTCTGATATA
CAAAATCTTGTATTCTCAATGGTAGAAAGACATAAAGAGGGTAAAGTAGGAGTAACATTACCTTCATTAAGAATAGATTC
TTTTTCAGTAGATTTAATAAAAGAAATACAAAAGGTTAGAAAAACCGGACTTACTTTTGCACCAGAAGCAGGAAGTCAAA
GGATGAGAGATGTTATAAATAAAGGTGTAACAGAAGAAAATTTAATGACCTCAGTAAAAAGTGCTTTTGAAGCAGGCTGG
TCTACTATAAAATTATACTTTATGCTAGGATTGCCTTATGAAACATTAGAAGATGTTATAGGAATAGCAGAGTTGGGACA
AAAGGTTGTACAAAAATATTATGAAGTTCCAAAGGAAGTAAGAAAGAAGGGACTTAAAGTTACTGTAAGTACATCTATTT
TTGTACCAAAGCCATTTACTCCATTTCAATGGGCACCACAGGATACCATGGAAGATGTAAGAAAGAAAATAGAGGCTGTA
AGAGGAGCTATAAAAAGCAAACAAATAACCTATAACTGGCATGAATCCTTAGTAAGTTATATGGAAGCTATATTTGCAAG
AGGAGATAGAAGAATTTGTGATGTTTTAATAAAAGCTTTTGAAAAAGGTGCTAGGTTTGATGGATGGAACCAATACTTTG
ACTTTAATATATGGAAAGAAGCATTGGAAGAAAGCAATGTAGATGGAGATTTCTATGCTTATAGACAAAGAGAATATGAT
GAAATACTTCCTTGGGATTTTGTAGATACAGGAGTTTCAAAGGAGTTCTTAATGAGAGAAAATGAAAGAGCTAAAAAGGC
AGAAGTAACTCCAGATTGTAGACAGGGCTGTAAGAATTGCGGAGTAAATGTTAATTTAGAAGGAGAGTGTTTTGAAGGTG
CGATATCTAATTAA

Upstream 100 bases:

>100_bases
CTTTTATAAGCATGGATAGAACAATGGATTCTTTTGTAATTGTTTTTATCCATGCTTATGTGTTAAAATGTAATAATGTG
ATAAACCATGAGGAGGAAAT

Downstream 100 bases:

>100_bases
ATTTTCAAAGGAAGGTAATATAAAATTTGTATCTCATTTAGACCTTCAAAGAACTCTACAAAGAAATTTTAAAAGAAGTG
GATTACCTGTAGAGTATTCA

Product: radical SAM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MMNRISDDVLFRVEKPARYIGGELNSYNKDLNDIDIRYAFCFPDVYEVGMSHLGMKILYYILNERKDIFCERVFAPWPDM
EKIMREENIPLYGLESKDPIKDFDFIGFTLQYEMSYTNILNMLDLAGVTIRASERREEEPIVMCGGPCAYNPEPLYNIAD
MFVLGEGEELNTKILDLYKKYKGKGNKREFLREASKIRGVYIPSLYEVTYKKDNTIKEFKPLYDDVPKKVKKVIINNIND
VVYPDKFVVPYTDIVHDRIVLETFRGCTRGCRFCQAGMIYRPVREKKTERLLELSDKLIKNTGYDEVTLSSLSICDYSDI
QNLVFSMVERHKEGKVGVTLPSLRIDSFSVDLIKEIQKVRKTGLTFAPEAGSQRMRDVINKGVTEENLMTSVKSAFEAGW
STIKLYFMLGLPYETLEDVIGIAELGQKVVQKYYEVPKEVRKKGLKVTVSTSIFVPKPFTPFQWAPQDTMEDVRKKIEAV
RGAIKSKQITYNWHESLVSYMEAIFARGDRRICDVLIKAFEKGARFDGWNQYFDFNIWKEALEESNVDGDFYAYRQREYD
EILPWDFVDTGVSKEFLMRENERAKKAEVTPDCRQGCKNCGVNVNLEGECFEGAISN

Sequences:

>Translated_617_residues
MMNRISDDVLFRVEKPARYIGGELNSYNKDLNDIDIRYAFCFPDVYEVGMSHLGMKILYYILNERKDIFCERVFAPWPDM
EKIMREENIPLYGLESKDPIKDFDFIGFTLQYEMSYTNILNMLDLAGVTIRASERREEEPIVMCGGPCAYNPEPLYNIAD
MFVLGEGEELNTKILDLYKKYKGKGNKREFLREASKIRGVYIPSLYEVTYKKDNTIKEFKPLYDDVPKKVKKVIINNIND
VVYPDKFVVPYTDIVHDRIVLETFRGCTRGCRFCQAGMIYRPVREKKTERLLELSDKLIKNTGYDEVTLSSLSICDYSDI
QNLVFSMVERHKEGKVGVTLPSLRIDSFSVDLIKEIQKVRKTGLTFAPEAGSQRMRDVINKGVTEENLMTSVKSAFEAGW
STIKLYFMLGLPYETLEDVIGIAELGQKVVQKYYEVPKEVRKKGLKVTVSTSIFVPKPFTPFQWAPQDTMEDVRKKIEAV
RGAIKSKQITYNWHESLVSYMEAIFARGDRRICDVLIKAFEKGARFDGWNQYFDFNIWKEALEESNVDGDFYAYRQREYD
EILPWDFVDTGVSKEFLMRENERAKKAEVTPDCRQGCKNCGVNVNLEGECFEGAISN
>Mature_617_residues
MMNRISDDVLFRVEKPARYIGGELNSYNKDLNDIDIRYAFCFPDVYEVGMSHLGMKILYYILNERKDIFCERVFAPWPDM
EKIMREENIPLYGLESKDPIKDFDFIGFTLQYEMSYTNILNMLDLAGVTIRASERREEEPIVMCGGPCAYNPEPLYNIAD
MFVLGEGEELNTKILDLYKKYKGKGNKREFLREASKIRGVYIPSLYEVTYKKDNTIKEFKPLYDDVPKKVKKVIINNIND
VVYPDKFVVPYTDIVHDRIVLETFRGCTRGCRFCQAGMIYRPVREKKTERLLELSDKLIKNTGYDEVTLSSLSICDYSDI
QNLVFSMVERHKEGKVGVTLPSLRIDSFSVDLIKEIQKVRKTGLTFAPEAGSQRMRDVINKGVTEENLMTSVKSAFEAGW
STIKLYFMLGLPYETLEDVIGIAELGQKVVQKYYEVPKEVRKKGLKVTVSTSIFVPKPFTPFQWAPQDTMEDVRKKIEAV
RGAIKSKQITYNWHESLVSYMEAIFARGDRRICDVLIKAFEKGARFDGWNQYFDFNIWKEALEESNVDGDFYAYRQREYD
EILPWDFVDTGVSKEFLMRENERAKKAEVTPDCRQGCKNCGVNVNLEGECFEGAISN

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 71491; Mature: 71491

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNRISDDVLFRVEKPARYIGGELNSYNKDLNDIDIRYAFCFPDVYEVGMSHLGMKILYY
CCCCCCCHHHEEECCCHHHHCCCHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
ILNERKDIFCERVFAPWPDMEKIMREENIPLYGLESKDPIKDFDFIGFTLQYEMSYTNIL
HHHCCHHHHHHHHCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEEECHHHHHH
NMLDLAGVTIRASERREEEPIVMCGGPCAYNPEPLYNIADMFVLGEGEELNTKILDLYKK
HHHHHCCCEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHEEEECCCCCHHHHHHHHHHH
YKGKGNKREFLREASKIRGVYIPSLYEVTYKKDNTIKEFKPLYDDVPKKVKKVIINNIND
HCCCCCHHHHHHHHHHCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
VVYPDKFVVPYTDIVHDRIVLETFRGCTRGCRFCQAGMIYRPVREKKTERLLELSDKLIK
CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
NTGYDEVTLSSLSICDYSDIQNLVFSMVERHKEGKVGVTLPSLRIDSFSVDLIKEIQKVR
CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEECCCCHHHHHHHHHHH
KTGLTFAPEAGSQRMRDVINKGVTEENLMTSVKSAFEAGWSTIKLYFMLGLPYETLEDVI
HCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHEEEEHHCCCCHHHHHHHH
GIAELGQKVVQKYYEVPKEVRKKGLKVTVSTSIFVPKPFTPFQWAPQDTMEDVRKKIEAV
HHHHHHHHHHHHHHHCHHHHHHCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
RGAIKSKQITYNWHESLVSYMEAIFARGDRRICDVLIKAFEKGARFDGWNQYFDFNIWKE
HHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHH
ALEESNVDGDFYAYRQREYDEILPWDFVDTGVSKEFLMRENERAKKAEVTPDCRQGCKNC
HHHHCCCCCCHHHHHHCCHHHCCCCCHHHCCCCHHHHHCCCCHHHHCCCCHHHHHHHHHC
GVNVNLEGECFEGAISN
CCEEECCCHHCCCCCCC
>Mature Secondary Structure
MMNRISDDVLFRVEKPARYIGGELNSYNKDLNDIDIRYAFCFPDVYEVGMSHLGMKILYY
CCCCCCCHHHEEECCCHHHHCCCHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
ILNERKDIFCERVFAPWPDMEKIMREENIPLYGLESKDPIKDFDFIGFTLQYEMSYTNIL
HHHCCHHHHHHHHCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEEECHHHHHH
NMLDLAGVTIRASERREEEPIVMCGGPCAYNPEPLYNIADMFVLGEGEELNTKILDLYKK
HHHHHCCCEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHEEEECCCCCHHHHHHHHHHH
YKGKGNKREFLREASKIRGVYIPSLYEVTYKKDNTIKEFKPLYDDVPKKVKKVIINNIND
HCCCCCHHHHHHHHHHCCCEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
VVYPDKFVVPYTDIVHDRIVLETFRGCTRGCRFCQAGMIYRPVREKKTERLLELSDKLIK
CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
NTGYDEVTLSSLSICDYSDIQNLVFSMVERHKEGKVGVTLPSLRIDSFSVDLIKEIQKVR
CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEECCCCHHHHHHHHHHH
KTGLTFAPEAGSQRMRDVINKGVTEENLMTSVKSAFEAGWSTIKLYFMLGLPYETLEDVI
HCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHEEEEHHCCCCHHHHHHHH
GIAELGQKVVQKYYEVPKEVRKKGLKVTVSTSIFVPKPFTPFQWAPQDTMEDVRKKIEAV
HHHHHHHHHHHHHHHCHHHHHHCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
RGAIKSKQITYNWHESLVSYMEAIFARGDRRICDVLIKAFEKGARFDGWNQYFDFNIWKE
HHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHH
ALEESNVDGDFYAYRQREYDEILPWDFVDTGVSKEFLMRENERAKKAEVTPDCRQGCKNC
HHHHCCCCCCHHHHHHCCHHHCCCCCHHHCCCCHHHHHCCCCHHHHCCCCHHHHHHHHHC
GVNVNLEGECFEGAISN
CCEEECCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]